| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31450 |
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| Symbol | |
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| ID | 8388469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3410233 |
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| End bp | 3411393 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977172 |
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| Product | Exodeoxyribonuclease I subunit D |
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| Protein accession | YP_003134945 |
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| Protein GI | 257057113 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.603328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACTCC TCCATACCTC CGACTGGCAT GTGGGACGGA CGTTCCACGG TACCGACCTG
CTCGCCGATC AGGACGCGGT ACTTCGGCAC CTGGCCGAAC TCGTCGAGCA GCTGTCCGTC
GACGTCGTAC TCGTGGCCGG TGACGTCTAC GACCGTGCGG TCCCGTCCGC CGAGGCCGTT
CGTGTGGCGA CGGCGGCCCT ACGGCGGCTC CGTGAGGCCG GAGCACAGCT CGTGATCACG
TCGGGGAACC ACGACTCGGC GGCCCGGCTC GGTGCGTTCG CCGATTTCGC CGAGGCCGGT
GGTCTGCACT TGCGCACCAC GGTCGATGCG ATCGATCGGC CCGTGCTGCT CGAGGATGAG
CACGGGCCGG TGGCGTTGTA CGGCATCCCT TATCTCGAAC CCGATCCGGC GCGGCATGCG
CTCGGCGTTC CCGAGGCCAA AGGGCATACC GGCGTGCTCA CCGAGGCCAT GCGTCGGGTC
AAAGAGGATC TGACGGAGCG GGAACCGGGC ACGCGATCGG TGGTGCTCGC CCACGCCTTC
GTGACCGGTG GCGTGGGCAG TGACTCGGAG CGCACGATCG CGGTCGGTGG GGTCGAGCAG
GTTCCGGGAT CCGTCTTCGA CGGTGTGGAT TACGTGGCCC TGGGGCATCT GCACGGGCCA
CAGCGGTTGG CCGAGCACCT GCGTTACTCC GGAAGTCCCT TGGCGTACTC GTTCTCCGAG
ACTTCCCGCA AATCGGTGTG GATCGTGGAC CTGGACGCGC AGGGACTGGC GGGAGTGGAC
CGGGTCGAAC TCCCCGTGCC GCGTGAGCTG GCGACCGTGC GAGGACGGTT GGACGAACTG
CTGGAGGATC CCGAGTACGG AAAGCTGAGT GGGTGTTACC TGTCGGTCAC GCTCACCGAT
CCCGTGCGAC CAGTCGACGC CATGCGCAGA TTGCGCACCC GCTTCCCCCA CGCCGTCCAT
CTCGAATGGC AGCCCGAGGG CGGTGCCGGT GCGGCACTGC GGTACTCGGA GGCGGTGCGT
GGGCGTACGG ATCTGGAGAT CGCCGAGGCC TTCATCGCTG ACTGTCGGGG CAGTGAGCCG
ACCGAGCGTG AACGTGACCT GCTGGTCGCG GCGTTGGAAG CCGCGGGAAG GGCGAACCCC
GAGCGGAAGG ACGTGCGATG A
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| Protein sequence | MRLLHTSDWH VGRTFHGTDL LADQDAVLRH LAELVEQLSV DVVLVAGDVY DRAVPSAEAV
RVATAALRRL REAGAQLVIT SGNHDSAARL GAFADFAEAG GLHLRTTVDA IDRPVLLEDE
HGPVALYGIP YLEPDPARHA LGVPEAKGHT GVLTEAMRRV KEDLTEREPG TRSVVLAHAF
VTGGVGSDSE RTIAVGGVEQ VPGSVFDGVD YVALGHLHGP QRLAEHLRYS GSPLAYSFSE
TSRKSVWIVD LDAQGLAGVD RVELPVPREL ATVRGRLDEL LEDPEYGKLS GCYLSVTLTD
PVRPVDAMRR LRTRFPHAVH LEWQPEGGAG AALRYSEAVR GRTDLEIAEA FIADCRGSEP
TERERDLLVA ALEAAGRANP ERKDVR
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