Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31300 |
Symbol | |
ID | 8388454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3396597 |
End bp | 3397208 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977159 |
Product | acetyltransferase, ribosomal protein N-acetylase |
Protein accession | YP_003134932 |
Protein GI | 257057100 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00339223 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.473848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAGA TCGAAACCAT GTCCGTACCG TCGTTCGCTG AGAAACCGAC TTTGCCGGGG CAACACGTCC TACTGCGTCC CGTGACCCCC GCCGACGCGC CCGCGCTCGT GGCCTCCCTG GCCGATCCGG AGGTGCGACG GCTCACCGGC ACACACCACG GCCTGGAACC CGGCAAGGAA TTGGAACAAG CGCGACACTG GTACGCCACC CGCGCCGACC ACACCGACCG ACTCGACCTG GCGATCGTCG AACGGGACAG CGGTGACTAC GTCGGCGAGG CCGTGTTGAC CGATCTCGAC GTCGACAACC TGTCGTGTTC GTTCCGTATC GCTCTCGCGG GCAGCCACCT GTTCGGACGC GGCTACGGCA CCGAGGCGAC CCGGCTGCTG CTCACGCACG CCTTCGACAC CGTGGGACTG CACCGGGTGG AGCTGGAGGT GTTCGCGTTC AATCCACGTG CTCGCCGTGT ATACGAGAAG GTGGGATTCG TGTGGGAGGG TACGAAACGT CACGCGCTGT GGTGGGACGG TGAGTGGATC GACCTGCACC TGATGGGTTT GCTCGCCGAC GAGTGGCGCG CCCACCGGGG ATATCCCGAG CGGACTCGGT GA
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Protein sequence | MSKIETMSVP SFAEKPTLPG QHVLLRPVTP ADAPALVASL ADPEVRRLTG THHGLEPGKE LEQARHWYAT RADHTDRLDL AIVERDSGDY VGEAVLTDLD VDNLSCSFRI ALAGSHLFGR GYGTEATRLL LTHAFDTVGL HRVELEVFAF NPRARRVYEK VGFVWEGTKR HALWWDGEWI DLHLMGLLAD EWRAHRGYPE RTR
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