| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31150 |
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| Symbol | |
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| ID | 8388439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3381343 |
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| End bp | 3383211 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977144 |
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| Product | ABC-type dipeptide transport system, periplasmic component |
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| Protein accession | YP_003134917 |
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| Protein GI | 257057085 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAACGA ACGGTGGTCG GAACACACCT TGGCTGGTCG CGTTGGTGCT GGCCCTCGTC
GGTGTCCTGG CCGCGTGTTC GAACACTCCG CCTCCGCCCG TCGTGAGCTC ACCTGTGGCT
GAGACGTCTG AACCACCTGT CGAAACACCC TCTCGGATCG TCGCGATGGT GGACGACATC
GTCGGCGGCT ACAACCCACA CCTCCTCGCC GACGTCTCCA CGGTGACCAC CGCGCTGTCC
CAGCTGTTGC TGCCCTCGGT GTTCCGAGCG AACGAGGAAG GTGAGCTCGA ACTCGACGAC
AGTCTCATGG AATCGGCCGA GGTGACCAGT GAGGACCCCT TCACGGTCAC CTATCGCATC
CGGCCGGACG CTTCGTGGTC CGACGGCGCA CCCATCGCCG TGGAGGACTT CTCCTATCTC
GCCAACGCCA TGAAGACCCA GCCGGGCGTG GTGAATCCCG CGGGCTACGA GTTGATCTCC
TCGATCGAAC CCGGTGAGGG GGGCAAGCTG GTTCGGGTCA CGTTCTCCGA GCCCTACCCC
GGCTGGCGGA CGTTGTTCTC CAACCTGCTG CCCGCGCACC TGATGAAGGA CGCCCCCGGT
GGTTGGCGTG GTGCGCTGTC CGAGAGTTTC CCCGCTTACG GGGGACCGTT CGGCATCAAG
ACGATCGACA TCGCCAGAGG CGAGATCGTC CTCGAACGCA ACGAGCGGTA CTGGGAGAAG
CCCGCCGCGG TGGACCGCCT CGTGCTTCAG CGTGCGGACG GGCCGGGCAT GGTGTCGGCC
CTGCGTAGTG GAAGCGCCCA GTTCGCGCTC GGCAGCGTCA ACGGCGACAC CCGCAAACTG
CTCGCCGACG TCAGCGAGGA CATCGGTCTG AGCACCGTGG CCCACCCGTA CGTGGTGGAT
GTGGTGCTGC GGCCGATCGG GCCGGCGTTG GTCGAGGACG AGGTTCGCCA GGCCGTCGCC
GCCTTGCTCG ACCGCGACGC GCTCATCGAC GAGGGCACGA GGGGTGGAGA CTCCGCCGAC
CTGCGTGCCG GCGCGCAGGT GCTGCCGCCG TCGGAGCCGG GGTACAAGCA CACCATCCCC
GGTTCCGGAC CGCCGTTGGA GCGGAACGCC AAGAAGGCGT ACAAGCTGCT GGCCGAGGCG
GGCTACGAAC GGGAAGCCGG CAGCTGGGTA CGGGACGGGC GCACGTTGTC GCTCGTGGTG
GCCTCGCCGG GGCAGAAACA ACCGTATGCC CGTATCGCGG CGAAGCTGGC GGAGCAGTTG
ATCGCCGAGG GGATCGAGGT GAACGTCGTT CACCCGCCGG CGCAGGAACT GTTCGGCTCG
GCCCTGTCCG CGACCGTCGA CCTGGACGGT GGTGCTCACG GTGAACCCGC CCCCGTCAAC
GGGCAGGTCG GCATCGACAT CGCGGTGGTT CCTCGCGCCG TCAGTGTCGA CCCGGCCACC
ACGTTGGCGT CGTGGTTCGG CTGTGACGCC GGGACCCAGG ACGACGATTC CGGCAGGACG
CAGGATCCGG ACTCCGGGAA CGACGATGCC GGGAAGACCG ACGGGAAGCG CGAGACCGCC
GGTCCGACGA CGAAGCCGAG TGAGTCGGGT GGTGCGGCGG AAGCCAAGCG GGTCGTGCCC
ACCAACACGG CCGGATTCTG TGACCCCGAG TTGCAGTCCG TCATCGATTC CATGCTCACG
GGTGAGACGT CGTTGAGGCA AGGGCTCGCC AAGGTCGAAC CCGAGCTTTG GGACCACATG
GTCTCCATCC CGTTGTTCCA GCTGGCCGAC ACGCTCGCCG TGGGGTCCGG GGTGTCCGGG
GTGACCGCCG GCCCTCCGCT GGTCGGGCCG TTCTCCTCGG CGGTCAACTG GACTCGCGCG
CCTCGTTAG
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| Protein sequence | MRTNGGRNTP WLVALVLALV GVLAACSNTP PPPVVSSPVA ETSEPPVETP SRIVAMVDDI
VGGYNPHLLA DVSTVTTALS QLLLPSVFRA NEEGELELDD SLMESAEVTS EDPFTVTYRI
RPDASWSDGA PIAVEDFSYL ANAMKTQPGV VNPAGYELIS SIEPGEGGKL VRVTFSEPYP
GWRTLFSNLL PAHLMKDAPG GWRGALSESF PAYGGPFGIK TIDIARGEIV LERNERYWEK
PAAVDRLVLQ RADGPGMVSA LRSGSAQFAL GSVNGDTRKL LADVSEDIGL STVAHPYVVD
VVLRPIGPAL VEDEVRQAVA ALLDRDALID EGTRGGDSAD LRAGAQVLPP SEPGYKHTIP
GSGPPLERNA KKAYKLLAEA GYEREAGSWV RDGRTLSLVV ASPGQKQPYA RIAAKLAEQL
IAEGIEVNVV HPPAQELFGS ALSATVDLDG GAHGEPAPVN GQVGIDIAVV PRAVSVDPAT
TLASWFGCDA GTQDDDSGRT QDPDSGNDDA GKTDGKRETA GPTTKPSESG GAAEAKRVVP
TNTAGFCDPE LQSVIDSMLT GETSLRQGLA KVEPELWDHM VSIPLFQLAD TLAVGSGVSG
VTAGPPLVGP FSSAVNWTRA PR
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