Gene Svir_31050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31050 
Symbol 
ID8388429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3368959 
End bp3369690 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID644977134 
Producthypothetical protein 
Protein accessionYP_003134907 
Protein GI257057075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00870089 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTCA CGGCGCGGCC GTTGCTCGTG TTCGTCCACA GCCCGTTGGT GGGCCCCTCG 
ACCTGGACGG CGGTGGCCGA GCGACTCGGG AGTCGATATC CGGTCGTCAC CCCCTCGCTG
ACCGGCGTGT TCGCGAAGAG CGGCGACCCG GGCCTCTACC ACGCACTCGC GGACGCCGTG
GCGCTGCCCG TGCCGGACAC CGGGGAGCCG GTGGTGCTCG TCGCTCACAG CGGGGCGGGG
GCACTGCTTC CGGTCGTCGC CGAGCGGCTC GGTGACCGGG TGCGGGCGGC CGTCTATGTC
GACGCCCTGC CACCGCACCC CGGCAGCCGC TGGCTCGACA CCGTCCCGCA GGAACTGCGG
GACCACCTCC TCGGTCTCGC CCACAACGGC TTGCTACCGC CGTGGAACGA ATGGTTCCCG
CCCGAGGTGC TCGCCGAGCT GCTGCCCGAA CCCGGCCTCC GCGAGAAGTT CGTCGCTGAA
CTGCCGAGAG TTCCGGTGAC GTACCTGGCC GAGCCCGCTC CCTCCGCAGC GGAGGTGAAC
CCGGCCGCCT ACCTGAGGTT GAGCGAGGGG TACGACGAGG TCGCCGACGA AGCTGAAAGC
CGAGGTTGGT GGGTACGTCG GCGGCAGTAC GACCACCTCG CTCCGCTGAC CCGGCCCGGC
GACGTCGCCG CCCTGGTCGA CGCGGCCGTC ACCGCACTCG ACGTAGGGAC GGGACCATCG
TCAGCACGGT GA
 
Protein sequence
MEVTARPLLV FVHSPLVGPS TWTAVAERLG SRYPVVTPSL TGVFAKSGDP GLYHALADAV 
ALPVPDTGEP VVLVAHSGAG ALLPVVAERL GDRVRAAVYV DALPPHPGSR WLDTVPQELR
DHLLGLAHNG LLPPWNEWFP PEVLAELLPE PGLREKFVAE LPRVPVTYLA EPAPSAAEVN
PAAYLRLSEG YDEVADEAES RGWWVRRRQY DHLAPLTRPG DVAALVDAAV TALDVGTGPS
SAR