| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31020 |
|---|
| Symbol | manB |
|---|
| ID | 8388426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3366597 |
|---|
| End bp | 3367952 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977131 |
|---|
| Product | phosphomannomutase/phosphoglucomutase |
|---|
| Protein accession | YP_003134904 |
|---|
| Protein GI | 257057072 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0815121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGACC TGTCTGCCAT CGTGAAGGCG TACGACATCC GTGGTGTCGT CGGTGAGGAC
TTGACCGAAG AGCTGGTCAC CGATTTCGGT GCAGCCTTCG CATTACTCAT CAAGCCCGAT
TCCCCGTCCG TAGTGGTCGG GCACGACATG CGGGAGTCGT CCCCGCGACT GGCGGACGCG
TTCGCGCGGG GTGTGACGTC CCAGGGGCTG GACGTGGTGT CGATCGGCCT GGTCAGCACC
GATGAGCTCT ACTTCGCGTC GGGATCGCTG AACATGCCGG GAGCGATGTT CACGGCCAGT
CACAACCCGG CGCGCTACAA CGGCATCAAG CTGTGCCGGG CCGGGGCGAG TCCGGTGGGG
CAGGAATCGG GGCTCGCCGA GATCAGGGAC ACCGTCGAGC AGGGAGTGCC CTCGTTCGCC
GGACAGCCCG GTACCGTCAC CGAGCGGGAT GTGCACGACG ACTACGTCAA GCACTTGCAC
TCGCTGGTCG ACCTCAGTGG CAGCCGCACC CTCAAGGTGG TCGTCGACGC GGGCAACGGT
ATGGGTGGTC TCACCGTGCC GCGGGTGTTC GAGGGGCTGC CCATCGAGAT CGTGCCGCTG
TACTTCGAAT TGGACGGCAC GTTCCCCAAT CACGAGGCCA ACCCACTCGA TCCCGCCAAC
ATCGTCGACC TGCAGGCCAA GGTCCGCGAG GTGGGCGCCG ACGTGGGGTT GGCGTTCGAC
GGCGACGCCG ACCGATGCTT CGTCGTGGAC GAGAACGGTG ATCCGGTGCC GCCGAGTGCC
ATCACCGCGT TGGTGGCCGT TCGCGAACTG AAGAAGGAAC CGGGCGCGAC GATCATCCAC
AACCTCATCA CCTCGAAGGC TGTGCCCGAG ATCGTGCGGG AGCACGGGGG CAGGCCGGTG
CGTACCCGTG TCGGGCACTC CTTCATCAAG GAGGAGATGG CCCGGACCGG GGCCATCTTC
GGCGGTGAGC ACTCGGCCCA CTACTACTTC CGTGACTTCT GGCGGGCTGA CACGGGCATG
TTGGCGGCCC TGCACGTGCT CGCCGCGTTG GGAGAGCAGG ACGGACCGCT GTCGGAGCTG
ACCGCCGAGT ACACCCGTTA CGTCTCCTCC GGGGAGATCA ACTCGACGGT GGACGACCAG
GCCGGACGAC TCGCCGCCGT GAAGGAGGCG TTCGCCAATC GCGACGGGGC CGAGATCGAC
GAGCTGGACG GGCTCACGGT CGACCTCGGG GAGGCCGGCT GGTTCAACCT CCGTCCCTCC
AACACCGAGC CGCTGCTCCG GTTGAACGTC GAAGCGGCCG ACGAGGCGTC GATGCGCGCC
TTGACCGACG AAGTCCTCGC CATCGTGCGC GGTTGA
|
|---|
| Protein sequence | MSDLSAIVKA YDIRGVVGED LTEELVTDFG AAFALLIKPD SPSVVVGHDM RESSPRLADA
FARGVTSQGL DVVSIGLVST DELYFASGSL NMPGAMFTAS HNPARYNGIK LCRAGASPVG
QESGLAEIRD TVEQGVPSFA GQPGTVTERD VHDDYVKHLH SLVDLSGSRT LKVVVDAGNG
MGGLTVPRVF EGLPIEIVPL YFELDGTFPN HEANPLDPAN IVDLQAKVRE VGADVGLAFD
GDADRCFVVD ENGDPVPPSA ITALVAVREL KKEPGATIIH NLITSKAVPE IVREHGGRPV
RTRVGHSFIK EEMARTGAIF GGEHSAHYYF RDFWRADTGM LAALHVLAAL GEQDGPLSEL
TAEYTRYVSS GEINSTVDDQ AGRLAAVKEA FANRDGAEID ELDGLTVDLG EAGWFNLRPS
NTEPLLRLNV EAADEASMRA LTDEVLAIVR G
|
|---|
| |