Gene Svir_31000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31000 
Symbol 
ID8388424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3365244 
End bp3366332 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID644977129 
Producthypothetical protein 
Protein accessionYP_003134902 
Protein GI257057070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTG ACGACAGTCT TCTCGACGAT CCGACGCGGT TGGCCGAGGC CGATGGCGAG 
GACCTGTTGC GGGCGGCGGC GATGGCCGGC GCACAGGTTC GGGCCACTGT CGAAACCGCC
GCGGAACTGG GGCTGGCCGA CCGGCTCGAC ATGGGTCGTC CCCGCAGTCT GGTACTCCTG
ACGAGACCGG GAGTCGGTCG TACGGCCGCG TCGTTGTTGA AGTCTCTTGT CATGGCGAGC
AGCTCGGCAC CGGTCGTCAC CAGTGATGTG GTGCCGAGTT GGGTCGGCGC GCTCGACGTG
GTGTTCGTCC ACACCGATGA CCCTTACGAC ACGGAGTTGG CCCTGTCCTT GGAGCGCGCG
GCACGGTACG GCGCCGGTGT GGTGTTGTCG GCACCTTCCG AAGGCCCCGT GGCGTCCTCG
GTGGCCGGCC GTGGACTCGT GCTAGCGCCG CGTGTGCCGG TGCCGGCCGA GCTGGCGTTG
CCGAGGGCGT TGGCCGCGGG GTTGTTGACG GCGAACACGC TGGGCCTGTC GGTCGCCGAC
GTCGAGGGCC TCGCCGACCG TCTGGACCAT GAGGCCGAGC GCTGCCATCC GGGGCAGGAA
TCGTTCGTCA ACCCGGCGAA GTCGCTGGCG TTGCGGCTGG CCGAGCACAC GCCGTTGCTG
TGGGGTCTGG ACAACGTGGC CGTGGCGGTG GCGGAGCACG CTGCGTACGC CTTGGCTACG
CACGCGGCCG TGGTGTCCGA GGTCAGCCAC TACCAGCATG CTCTGACGCG CTCGGCGCTA
CGTCGAGCGG TTCTGAAGTC GTTCGCGGTG GATACGATTT TCGCCGACCC GGACGAGTCG
GAGGGCGACG TGCTGCCGAT CCGCCTGGTG CTGCTGTCGA TAATCACAGG CCAGGCTGCC
GATCACGTTC GGCGTCATGC GGGGGAGCTG TTGCCGTCGG CGGATGTTCA GGCACCGGCG
GATGAGATCA CAGCCGACGA CGCTGGCCGT GCGGCCGTGC TCGCGCTGCG TTTCGAGCTC
GCGGCGCTCT ATCTCGGTCT CGCGGCAGGA ACGATTGGGG GAGCTGGCCG TGCGTCTGAG
ACGACGTAG
 
Protein sequence
MALDDSLLDD PTRLAEADGE DLLRAAAMAG AQVRATVETA AELGLADRLD MGRPRSLVLL 
TRPGVGRTAA SLLKSLVMAS SSAPVVTSDV VPSWVGALDV VFVHTDDPYD TELALSLERA
ARYGAGVVLS APSEGPVASS VAGRGLVLAP RVPVPAELAL PRALAAGLLT ANTLGLSVAD
VEGLADRLDH EAERCHPGQE SFVNPAKSLA LRLAEHTPLL WGLDNVAVAV AEHAAYALAT
HAAVVSEVSH YQHALTRSAL RRAVLKSFAV DTIFADPDES EGDVLPIRLV LLSIITGQAA
DHVRRHAGEL LPSADVQAPA DEITADDAGR AAVLALRFEL AALYLGLAAG TIGGAGRASE
TT