| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30920 |
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| Symbol | |
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| ID | 8388416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3354443 |
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| End bp | 3356203 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977121 |
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| Product | lipoprotein LpqB family protein/sporulation and spore germination protein |
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| Protein accession | YP_003134894 |
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| Protein GI | 257057062 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAGGT GCGGCGCCGG GAACAGAGCG GTCGCGGTTT TGGTGGCCGT TCTCACCTGT
GCCCTCGTGA CGGCGGGGTG TGCGGCGATC CCGACCGAGT CCCAGCCGAG GGCCGTTCCG
CAGCAGAACG CGGGCCAGCC CACCCAGGAG ATCCCGGAAC CCCAGGCCAA CCTCGACCCG
CTGTCGGTGG TGCGGGAATT CGTGCGCAAC GGTGCGCAGA CCGCCAACGA CCACGCGGCC
TCCCGGGCCT ATCTCGCCAC CCGGATCCAG GAGAGTTGGA AGCCGGGGTC GAGTGTGACG
GTGATCAGGG ACGATTTCGG CACGGTGTAC GCCCCCGAGG CCGAGCAGCC GAAGGACCCC
AACCAGCGTG TGGTCGCTCT TCGGGCCACT GTGCTGGGGC GGTTGGCGTC CGACAACTCG
TTCATCGCGG ATGAGCAGAA ATCCATCCGT AAACCCGTCC GACTGCAGCG GCAGTCCGAC
GGGGAGTGGC GCATCGTCGA ACCGCCCGAC AACATCATGA TCACCGAGAG CGACTTCTCG
GAGGCGTATC GCCAGGTTCC GGTGTATTTC TTCGCGCCGG ACGCCCCTGC TCTCGTCCCC
GACGTGCGGT ATGTGGTGGC TCGGCCGCAG TCGGGGCTGC CCGCCCGGGT CATCGACCTG
TTGCTGTCCG GGCCGTCCGA CGGCCTGGCC GGAGCCGTCC GCAACCCGCT CGAGGACACC
ACGCTCGACA GCAACGTCAC GACGAACAGT GACGGGTCGT TGGTCGTGCC GTTGACGGGG
CTGGGCGACG AAAGCGAGCA GGACCGGAAG TCGATGGCCG CGCAGATCGT GCGGTCGTTG
CAGCACGTCA CCACGAGCAG GGTCAAGTTG CTGTCCGACG GCGCCCCGCT CGTGCCGGGA
CAGCCGGAGT GGCGGCCCAG CGACCTCCCC GCCTACGACA CCGTGTCGTC GCCTAGTTCG
GAGCTGCCGG GACTGCTGAC GCTGAACGGT CGGGTGCACT CGCTCGGCAA CGGCGCGCCG
ATCAACGGGC CGGCGGGCGA CGGGACCTAC GACGTCGTCA GCGCGGCGCA ACCGATCAAC
GGTCAGCAGC TGGCCGTGGT GGAACGTGTC GGTGAGGGGG TGCGGCTGCG TGTCGGCGGC
TACGGTGGTC CGACGCAAGT GGTGGATCAG CAGGCCAAGA CCATGACCCG GCCGACCTGG
CGACCACCCG TGACCTCGGA CGACAAGTCG ACCGAGGTGT GGACCGTCGT CGACGGTAGG
CAGGTGATCC GGGTCCAGCA GAACCCGGCG GGACGGTGGG TGACCCAACG GGTCAACGCC
TTCGACCTTC CCGACGAAGG GGCGATCACG GGGCTGCGGC TGTCCCGCGA CGGCACGCGG
GCCGCGCTCA TCGTGGATCG ACAACTCGTC GTGGCGTCGG TGGTGCGTTC TCCCACCGAG
GTCACGTTGC GCGCCCCGCG GGTGTTGCAG GAAGGTCGGA TGGACTCGGT CGTGGATGTG
GACTGGCTCG ACCAGGACAC GCTCGTCGTC GCCTTGACGT CCGAACGTTT CCCCGTGGTC
CGGGTGTCGG TGGACGGTTT CCGGCTCGAC CAGTACAACA GCTCGAACCT GATGCAGCCG
ATACGTGCGA TCACCGCGGC ACCGGGACGG CCCATCGTCG TGGCCGACAG GAACGGCCTG
TGGACGGTCA GTGAGATCGG CGCGGTGTGG CGGCCGCATC AGCAGAGTTC GCCGAACGCC
GTCCCGTTCT ACCCGGGCTG A
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| Protein sequence | MTRCGAGNRA VAVLVAVLTC ALVTAGCAAI PTESQPRAVP QQNAGQPTQE IPEPQANLDP
LSVVREFVRN GAQTANDHAA SRAYLATRIQ ESWKPGSSVT VIRDDFGTVY APEAEQPKDP
NQRVVALRAT VLGRLASDNS FIADEQKSIR KPVRLQRQSD GEWRIVEPPD NIMITESDFS
EAYRQVPVYF FAPDAPALVP DVRYVVARPQ SGLPARVIDL LLSGPSDGLA GAVRNPLEDT
TLDSNVTTNS DGSLVVPLTG LGDESEQDRK SMAAQIVRSL QHVTTSRVKL LSDGAPLVPG
QPEWRPSDLP AYDTVSSPSS ELPGLLTLNG RVHSLGNGAP INGPAGDGTY DVVSAAQPIN
GQQLAVVERV GEGVRLRVGG YGGPTQVVDQ QAKTMTRPTW RPPVTSDDKS TEVWTVVDGR
QVIRVQQNPA GRWVTQRVNA FDLPDEGAIT GLRLSRDGTR AALIVDRQLV VASVVRSPTE
VTLRAPRVLQ EGRMDSVVDV DWLDQDTLVV ALTSERFPVV RVSVDGFRLD QYNSSNLMQP
IRAITAAPGR PIVVADRNGL WTVSEIGAVW RPHQQSSPNA VPFYPG
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