| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30900 |
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| Symbol | |
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| ID | 8388414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3352444 |
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| End bp | 3353124 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644977119 |
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| Product | SSU ribosomal protein S30P/sigma 54 modulation protein |
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| Protein accession | YP_003134892 |
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| Protein GI | 257057060 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG TCATCAAGGG TCGCAACGTG GAGGTTCCCG AGCATTATCG GAACCACGTC
GCGGGGAAGA TGGCCCGACT GGAGCGTTAC GACAGAAAGG TCATCAGCTA CGACGTGGAG
CTCTACCACG AGCCCAATCC CCGGCAGGCC AAGACCTGCC AACGCGTCGA GATCACCGGC
AAGGGCAAGG GCCCGGTCGT TCGTGCCGAG GCACGAGCAG GCGACTTCTA CACGGCGCTC
GACTCCGCGA TCAGGAAGTT GGAGAGCCGG CTTCGCCGGA TGCACGATCG GCGACGTGTC
CATTACGGGC GACGGAGCCC GGAGTCCCTC GCCGAGGCCA CCGCGGCGGC CTTCCGGGCG
TCGACGGCGG GTCGTGGTCG TGGCCGTGGC GGGACCGCTG TGTTGGAGGC CCCTACCGAG
CCCGTGACCT CCTCGACCGA CGAGACAGCC GAGTTGGACG TGCCCGAGCA GCGTTGGGAC
GACGGTGTCG TTCCCCGGCA ACCCGGGCGC ATCGTGCGGG AGAAACAGCA TTCGGCCGAA
CCGATGACGA TCGACGATGC CCTGTACCAG ATGGAACTCG TGGGTCACGA CTTCTATCTG
TTCAATGACT CCGAGACCGG GAAACCCAGC GTCGTGTACC GACGGAAAGG GTTCGATTAC
GGAGTGATTC GACTGGGCTG A
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| Protein sequence | MDIVIKGRNV EVPEHYRNHV AGKMARLERY DRKVISYDVE LYHEPNPRQA KTCQRVEITG
KGKGPVVRAE ARAGDFYTAL DSAIRKLESR LRRMHDRRRV HYGRRSPESL AEATAAAFRA
STAGRGRGRG GTAVLEAPTE PVTSSTDETA ELDVPEQRWD DGVVPRQPGR IVREKQHSAE
PMTIDDALYQ MELVGHDFYL FNDSETGKPS VVYRRKGFDY GVIRLG
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