Gene Svir_30740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30740 
Symbol 
ID8388398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3335236 
End bp3335586 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content65% 
IMG OID644977103 
Productanti-sigma factor, TIGR02949 family 
Protein accessionYP_003134876 
Protein GI257057044 
COG category 
COG ID 
TIGRFAM ID[TIGR02949] anti-sigma factor, TIGR02949 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0992034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTC GCGACGGCTC AAGCGGCTCG GGCGAGAGGT CCGACAAGGT TAGCTGCGAC 
GACGCACTGG CGGAGATCTA TCTCCTGCTG GACAAGGAAT GCACCCCCGA GCGGGACGCC
GAGTTGCGAC GGCACATCGA GGACTGTCCC CCGTGTCTGG AGGAGTACGG GATCGACGAG
CAGATCAAAC AGCTACTCGC CCGCAAGTGC GGTGGTGAGC ACGCACCCGC CGAGCTGAAG
CACCGGCTCC AGGAGTCGAT TCGACGAACC GTCGCGGAAC GGAGCGGACA GTCTCTGGAG
GAAACCGAGT TGCGGCTCCA GCGCACCACG GAGCCGCCGG TCCAGTCCTG A
 
Protein sequence
MTLRDGSSGS GERSDKVSCD DALAEIYLLL DKECTPERDA ELRRHIEDCP PCLEEYGIDE 
QIKQLLARKC GGEHAPAELK HRLQESIRRT VAERSGQSLE ETELRLQRTT EPPVQS