| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30730 |
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| Symbol | |
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| ID | 8388397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3334589 |
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| End bp | 3335239 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644977102 |
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| Product | RNA polymerase sigma-70 factor, TIGR02947 family |
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| Protein accession | YP_003134875 |
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| Protein GI | 257057043 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.159272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCGAGCA CCCAGAGCCC TGTCGACATC CCCACGGCAG CGTCGGAGCC CGGAACGAAC
ACCGAGCGCG AGCTGGCCGA GCGGTTCGAA CGTGAAGCCA TGCCGCTGGT CGATCAGCTC
TACTCGGCAG CGATGCGCAT GACGCGTAAT CCGGCCGATG CCGAGGATCT CGTTCAAGAG
ACGTATCTCA GGGCGTACGC AGCCTTCTCC TCGTTCAAGG AAGGCACGAA CCTCAAGGCG
TGGATGTACC GCATCCTCAC CAACACCTAC ATCAACGGTT ACCGAAAGCG GCAGCGGCAA
CCGGTCCAGC AACCCACCGA GGAAATCACC GACTGGCAGC TGGCGAAGGC GGAGAGCCAC
ACCTCGGCCG GCCTGCGGTC GGCCGAGGTC GAAGCGTTGG ACAAACTGCC CGACACGGAC
GTGAAGGCGG CACTGCAACA GCTGCCGGAG GACTTCCGGT TGGCCGTCTA TCTTGCCGAC
GTCGAGGGGT TCGCCTACAA AGAGATCGCT GAGATCATGA ACACACCCAT CGGCACCGTG
ATGTCGCGTC TGCACCGTGG TCGGGGCCAG TTGCGGAGCC TGCTCGCCGA CGTTGCCCGG
GAGCGGGGTT TCATCCGCTC CGGTCAGCAG CGGGAGGTGG CACGTCGATG A
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| Protein sequence | MPSTQSPVDI PTAASEPGTN TERELAERFE REAMPLVDQL YSAAMRMTRN PADAEDLVQE
TYLRAYAAFS SFKEGTNLKA WMYRILTNTY INGYRKRQRQ PVQQPTEEIT DWQLAKAESH
TSAGLRSAEV EALDKLPDTD VKAALQQLPE DFRLAVYLAD VEGFAYKEIA EIMNTPIGTV
MSRLHRGRGQ LRSLLADVAR ERGFIRSGQQ REVARR
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