Gene Svir_30720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30720 
Symbol 
ID8388396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3333939 
End bp3334415 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID644977101 
ProductybaK/ebsC protein 
Protein accessionYP_003134874 
Protein GI257057042 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.685744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGTA AGGGAACACC CGCGACCACG TTGTTGGCCA AGCGCAGGAT TGCACACAAG 
CTGCACATGT ACGACCACGA CCCGCGACAG GAGTCGTATG GTTTGGAGGC CGTGGCCGCA
CTGGGGATTG CCGCGGAGCG GGTGTTCAAA ACACTGGTCG CCGAGGTTGA CGGCAAGCTC
ACAGTCGGAG TGGTCCCCGT CACGGCTCAG CTCAATCTGA AGGCCCTCGC CGCTGCCGCG
GGTGGCAAGA AGGCGAAGCT GGCCGACGCC GCGACCGCCC AACGGGCCAC CGGATACGTG
CTGGGCGGGA TCTCACCACT GGGGCAACGA ACCCGTCTGC CCGTCGTGGT GGACGCCTCG
GCCCGGCGGT TCGACACCGT GTTCTGCTCG GGTGGACGCC GGGGCTTGGA AATCGAACTC
GCCCCCGACG ATCTCGTGGC TCTCACCGGC GCCACGGTGG CGCCCATCGC AGGCTGA
 
Protein sequence
MAGKGTPATT LLAKRRIAHK LHMYDHDPRQ ESYGLEAVAA LGIAAERVFK TLVAEVDGKL 
TVGVVPVTAQ LNLKALAAAA GGKKAKLADA ATAQRATGYV LGGISPLGQR TRLPVVVDAS
ARRFDTVFCS GGRRGLEIEL APDDLVALTG ATVAPIAG