Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30600 |
Symbol | |
ID | 8388384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3320522 |
End bp | 3322096 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977089 |
Product | subtilisin-like serine protease |
Protein accession | YP_003134862 |
Protein GI | 257057030 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGAGGGC ATCGAAAACT CAGCGGCAGA ACCCTTGCCG GTGTCGGAAT CACCGCCGGG GTCGCCGTCC TCGCGGCGTT GGGGGGCAAT CTCCCCGCGG CCGCTCAGGA GGGCGTCATC ATCGGTGCGA ACGCCGAAGA CGCCATCGAC AACAGCTACA TCGTCGTGCT CAAGGACGGG ACGTCGGTCA CCGACGTCGC CGACCGGCAC GGTGCCGATG TGGAACACGT CTACGAACAC GCGCTCAACG GTTTCTCGGC CACGATGAGC GAGGCCATGG CCAAACGCGC GGCGGCCGAT CCTCGTGTGG CCTACGTGGA GCAGAACCGC GTGTTCCACA CGACGGCGGA ACAGACCAAC CCGCCGTCGT GGGGTTTGGA CCGGGTCGAC CAGCGTAACC TGCCGCTGGA CGACTCCTAC AGCTACGACA CCACAGCCTC CAACGTGGAG GCCTACGTCA TCGACACGGG TATCCGGATC ACGCACGAGG ACTTCGAGGG ACGTGCGCGG CACGGATACG ACTTCGTCGA CAACGACAGC AACGCCGACG ACTGCAACGG GCACGGCACG CACGTGGCGG GCACCATCGG CGGCAGCTCC TACGGTGTGG CCAAGGGCGT CGAACTGATC GCCGTCCGAG TGCTCAACTG CCAGGGCTCC GGTACCTACG ACGGCGTGAT CGCCGGCATC GACTGGGTCA CCGAGAACGC CACCGCTCCG GCCGTGGCGA ACATGAGCCT CGGCGGCGGC GCGTCCACCG CCGTGGACGA CGCGGTGCGC CGCTCCATCG CCGCGGGTGT GACGTACGCG CTGGCCGCGG GTAACGACTA CGGCGCCGAC GCCTGCAACA GCTCTCCCGC CCGGACCGAG GAAGCCATCA CGGTCGGCTC CACCACGCGC ACCGACGCGC GGTCGAGCTT CTCCAACATC GGCCGCTGCG TCGACATCTT CGCCCCGGGC AGTGACATCA CGTCCGCCTG GATCGGTAGC GACACCGACT CCAGCACCAT CAGCGGTACG TCGATGGCCA CTCCGCATGT CGCGGGTGCG GCGGCGCTGT ACCTGGCCGA CAACCCGTCG GCGAGCCCGC AGCAGGTGCG GGACGCGCTG GTGGACAACG GCACCAGCGG CGTGGTGGGC AACCCCGGCA GCGGTTCGCC CAACGTGCTG CTCTACACCG GCGCCGGTAG CTCGGACCCG GACCCGAACC CCGAGCCTGA GCCGACCGAA TGCGAGCCGG TCACCAACGG CACGGATGTC GACATCCCGA ACCCGGGCAC GGTCACCAGC ACCATCGAGA TCACCGGGTG CGAGGGCAAC GCGTCGAGCA GCGCGACCAT CGACGTGGAC ATCCGCCACA GCTACCGCGG TGACCTGGTG ATCGACCTGG TCGCTCCGGA CGGCGAGACG ACCCGGTTGA AGAGCTCCTC GCTCTTGGAC TTCGGCAGCG ACGTGATCAC GACCTACACG GCCGACCTGT CGAACTCGCC CGCCAACGGC ACGTGGACGT TGCGCGTGCA GGACGTCTAC TACGGTGACT CCGGCTACAT CAACAGCTGG ACGCTCACCC TGTGA
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Protein sequence | MRGHRKLSGR TLAGVGITAG VAVLAALGGN LPAAAQEGVI IGANAEDAID NSYIVVLKDG TSVTDVADRH GADVEHVYEH ALNGFSATMS EAMAKRAAAD PRVAYVEQNR VFHTTAEQTN PPSWGLDRVD QRNLPLDDSY SYDTTASNVE AYVIDTGIRI THEDFEGRAR HGYDFVDNDS NADDCNGHGT HVAGTIGGSS YGVAKGVELI AVRVLNCQGS GTYDGVIAGI DWVTENATAP AVANMSLGGG ASTAVDDAVR RSIAAGVTYA LAAGNDYGAD ACNSSPARTE EAITVGSTTR TDARSSFSNI GRCVDIFAPG SDITSAWIGS DTDSSTISGT SMATPHVAGA AALYLADNPS ASPQQVRDAL VDNGTSGVVG NPGSGSPNVL LYTGAGSSDP DPNPEPEPTE CEPVTNGTDV DIPNPGTVTS TIEITGCEGN ASSSATIDVD IRHSYRGDLV IDLVAPDGET TRLKSSSLLD FGSDVITTYT ADLSNSPANG TWTLRVQDVY YGDSGYINSW TLTL
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