Gene Svir_30600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30600 
Symbol 
ID8388384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3320522 
End bp3322096 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content68% 
IMG OID644977089 
Productsubtilisin-like serine protease 
Protein accessionYP_003134862 
Protein GI257057030 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAGGGC ATCGAAAACT CAGCGGCAGA ACCCTTGCCG GTGTCGGAAT CACCGCCGGG 
GTCGCCGTCC TCGCGGCGTT GGGGGGCAAT CTCCCCGCGG CCGCTCAGGA GGGCGTCATC
ATCGGTGCGA ACGCCGAAGA CGCCATCGAC AACAGCTACA TCGTCGTGCT CAAGGACGGG
ACGTCGGTCA CCGACGTCGC CGACCGGCAC GGTGCCGATG TGGAACACGT CTACGAACAC
GCGCTCAACG GTTTCTCGGC CACGATGAGC GAGGCCATGG CCAAACGCGC GGCGGCCGAT
CCTCGTGTGG CCTACGTGGA GCAGAACCGC GTGTTCCACA CGACGGCGGA ACAGACCAAC
CCGCCGTCGT GGGGTTTGGA CCGGGTCGAC CAGCGTAACC TGCCGCTGGA CGACTCCTAC
AGCTACGACA CCACAGCCTC CAACGTGGAG GCCTACGTCA TCGACACGGG TATCCGGATC
ACGCACGAGG ACTTCGAGGG ACGTGCGCGG CACGGATACG ACTTCGTCGA CAACGACAGC
AACGCCGACG ACTGCAACGG GCACGGCACG CACGTGGCGG GCACCATCGG CGGCAGCTCC
TACGGTGTGG CCAAGGGCGT CGAACTGATC GCCGTCCGAG TGCTCAACTG CCAGGGCTCC
GGTACCTACG ACGGCGTGAT CGCCGGCATC GACTGGGTCA CCGAGAACGC CACCGCTCCG
GCCGTGGCGA ACATGAGCCT CGGCGGCGGC GCGTCCACCG CCGTGGACGA CGCGGTGCGC
CGCTCCATCG CCGCGGGTGT GACGTACGCG CTGGCCGCGG GTAACGACTA CGGCGCCGAC
GCCTGCAACA GCTCTCCCGC CCGGACCGAG GAAGCCATCA CGGTCGGCTC CACCACGCGC
ACCGACGCGC GGTCGAGCTT CTCCAACATC GGCCGCTGCG TCGACATCTT CGCCCCGGGC
AGTGACATCA CGTCCGCCTG GATCGGTAGC GACACCGACT CCAGCACCAT CAGCGGTACG
TCGATGGCCA CTCCGCATGT CGCGGGTGCG GCGGCGCTGT ACCTGGCCGA CAACCCGTCG
GCGAGCCCGC AGCAGGTGCG GGACGCGCTG GTGGACAACG GCACCAGCGG CGTGGTGGGC
AACCCCGGCA GCGGTTCGCC CAACGTGCTG CTCTACACCG GCGCCGGTAG CTCGGACCCG
GACCCGAACC CCGAGCCTGA GCCGACCGAA TGCGAGCCGG TCACCAACGG CACGGATGTC
GACATCCCGA ACCCGGGCAC GGTCACCAGC ACCATCGAGA TCACCGGGTG CGAGGGCAAC
GCGTCGAGCA GCGCGACCAT CGACGTGGAC ATCCGCCACA GCTACCGCGG TGACCTGGTG
ATCGACCTGG TCGCTCCGGA CGGCGAGACG ACCCGGTTGA AGAGCTCCTC GCTCTTGGAC
TTCGGCAGCG ACGTGATCAC GACCTACACG GCCGACCTGT CGAACTCGCC CGCCAACGGC
ACGTGGACGT TGCGCGTGCA GGACGTCTAC TACGGTGACT CCGGCTACAT CAACAGCTGG
ACGCTCACCC TGTGA
 
Protein sequence
MRGHRKLSGR TLAGVGITAG VAVLAALGGN LPAAAQEGVI IGANAEDAID NSYIVVLKDG 
TSVTDVADRH GADVEHVYEH ALNGFSATMS EAMAKRAAAD PRVAYVEQNR VFHTTAEQTN
PPSWGLDRVD QRNLPLDDSY SYDTTASNVE AYVIDTGIRI THEDFEGRAR HGYDFVDNDS
NADDCNGHGT HVAGTIGGSS YGVAKGVELI AVRVLNCQGS GTYDGVIAGI DWVTENATAP
AVANMSLGGG ASTAVDDAVR RSIAAGVTYA LAAGNDYGAD ACNSSPARTE EAITVGSTTR
TDARSSFSNI GRCVDIFAPG SDITSAWIGS DTDSSTISGT SMATPHVAGA AALYLADNPS
ASPQQVRDAL VDNGTSGVVG NPGSGSPNVL LYTGAGSSDP DPNPEPEPTE CEPVTNGTDV
DIPNPGTVTS TIEITGCEGN ASSSATIDVD IRHSYRGDLV IDLVAPDGET TRLKSSSLLD
FGSDVITTYT ADLSNSPANG TWTLRVQDVY YGDSGYINSW TLTL