Gene Svir_30590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30590 
Symbol 
ID8388383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3318994 
End bp3320355 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content63% 
IMG OID644977088 
Productpredicted flavoprotein involved in K+ transport 
Protein accessionYP_003134861 
Protein GI257057029 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.888555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGC GCGTCGCTGT GATCGGAGCG GGACCGGGCG GATTGGCTCA ATTGCACGCC 
TTCGCGGAGG CGGGCAAGAA CGGGGCCGAG CTTCCCGAGC TGGTCTGCTT CGAAAAGCAA
AGCGACTGGG GCGGGATGTG GAACTACACC TGGCGGACCG GAGTGGACGA GGCCGGCGAC
CCCGTACACG CCAGCATGTA CCGCCATCTG TGGTCGAACG GCCCCAAGGA ATGCCTTGAA
TTCGCGGATT ACACGTTCGA CGAACATTTC GGAAAGCCCA TCCCCTCCTA CCCGCCGCGC
GAGGTTCTTT ACGATTACCT CCTGGGCCGG GCGCGCAAGA ATGACATTCG TAAATACATT
CAGTTCGGGA CGGCGGTCCG ATGGGTTTCC CACAACGCCG AGAAGAACAC CTTCAACGTC
ACCGTCGAGG ATCTGAAAAC GGGCGACCAT CGCACCGAGG AATTCGATTA CGTCATCGTT
TCCACCGGGC ACTTCTCCGT CCCGAACATG CCGGACTTCC CCGGGTTCGA GCAGTTCCCC
GGCCGTATCC TGCACTCACA CGACTTCCGG GACTCACGCG AGTTCGCCGG ACAGGACCTG
CTCATCATCG GCAGCAGCTA TTCGGCTGAG GACCTCGCCC TTCAGGTGAA GAAGTACGGC
GCCAACTCGG TGACCATCAG CTACCGCACC GCCCCGATGG GATTCGCCTG GCCGGAGGGG
ATCACTGAGG TCCCGCTGCT CACCCGCCTG GACGGGAACA CGGCCCACTT CGCCGACGGC
AGCTCCCGGC GAGTGGACAC GATCCTGTTG TGCACCGGCT ACCGGCACCA CTTCCCGTTC
CTCGAGAACA GCCTGCGCCT GCGCACCAAG AACGTCCTGT ACCCGGACAA CCTGTACAAG
GGCGTCTTCT GGGTGGACAA CCCGAACCTG ATGTACCTGG CCATGCAGGA CCTGTACTAC
ACGTTCACGT TGTTCGACGC GCAGGCCTGG TACGCCCGGG ATTACGTACT CGGCCGTGTG
AACCTCCCCT CCGCCGACCA GATGCGCGAG GAGATCGCGA GCTGGCGGGC TCGGGAAGAG
GCGCTGTCCA GCATGATGGA GGCCGTCGAG TTCCAGGCCG ACCACCTTCG GGACCTCCTG
CAGAACCTGG ACTACCCGAA GTTCGACGTC GACATGACCG TGGAGCACTT CCGCACCTGG
CTCGGCCACA AGCAGGAAGA CATCACCGGC TACCGGAACC GCGGCGGCTT CGCCTCGCCC
GTCACCGGCA CCGTGTCGCC CGCACTCCAC ACCTCCTGGT GGGAGATGCT GGACGACTCC
CCCGAGGCCT TCCTCGGTGA ATCCGCCGGC AGCGCGAAGT AA
 
Protein sequence
MASRVAVIGA GPGGLAQLHA FAEAGKNGAE LPELVCFEKQ SDWGGMWNYT WRTGVDEAGD 
PVHASMYRHL WSNGPKECLE FADYTFDEHF GKPIPSYPPR EVLYDYLLGR ARKNDIRKYI
QFGTAVRWVS HNAEKNTFNV TVEDLKTGDH RTEEFDYVIV STGHFSVPNM PDFPGFEQFP
GRILHSHDFR DSREFAGQDL LIIGSSYSAE DLALQVKKYG ANSVTISYRT APMGFAWPEG
ITEVPLLTRL DGNTAHFADG SSRRVDTILL CTGYRHHFPF LENSLRLRTK NVLYPDNLYK
GVFWVDNPNL MYLAMQDLYY TFTLFDAQAW YARDYVLGRV NLPSADQMRE EIASWRAREE
ALSSMMEAVE FQADHLRDLL QNLDYPKFDV DMTVEHFRTW LGHKQEDITG YRNRGGFASP
VTGTVSPALH TSWWEMLDDS PEAFLGESAG SAK