| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30580 |
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| Symbol | kgd |
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| ID | 8388382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3314853 |
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| End bp | 3318608 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977087 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_003134860 |
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| Protein GI | 257057028 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.303495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAGCA GCAGCCCTGC GTCACAATTC GGTCCCAACG AGTGGCTCGT CGAGGAGATG
TACGACCGCT TCCTCGACGA CCCTTCCTCA GTCGATGCCG CATGGCATGA GTTCTTCGCC
GACTTCCAAC CCAGCCAGGA TGCACAGGCA CGGTCCGAAG GCGCAGAGCA GAAGTCGCCA
GCCAACGGCC AGCCAGCAAC GCAGACCGCC CCGAAGCAGA CAGCGCCGGC GACGCCGACC
ACGTCCCCGT CCCCGAAGAC GGAATCCGTC GCGGCACCCC AGACCACGCC CCAGGGCGCA
AAGACCAAAC CCGCCACGCC GAAGAGCGAG CCGCCGCAGT CCACGCCCGG CTCCACCGGT
ACCTCCGCGA CCGCGAGGAC CGCACCGCCG AAGAAGCCGA GCGAGCCCGA GCGCAAGCCG
CTGCGCGGTG TGGCCGCGAC CATCGCCAAG AACATGGACG CCTCGCTGAG CGTCCCCACC
GCCACCAGCG TGCGCGCCGT GCCCGCGAAG CTGATGGCCG ACAACCGGAT CGTCATCAAC
AACCACCTGA GGCGCGCCCG TGGGGGCAAG GTCTCCTACA CCCACCTCAT CGGGTACGCG
ATGATCCGCG CGCTGCACGA CTTCCCCAAC ATGAACCGGC ACTACGCCGT CATCGACGGC
AAGCCGCACG TGGTGACGCC TGAGCACATC AACCTCGGCC TCGCCATCGA CATGAAGGGC
AAGGACGGGC AGCGCTCCCT GGTCGTGGCC TCCATCAAGA ACTGCGAGAA CATGACGTTC
CTCCAGTTCT GGCAGGCCTA CGAGGACATC GTCCGCAAGG CGCGGAACAA CAAGCTGACC
GCCGACGACT TCGCCGGCAC CACGATCTCG CTGACCAACC CGGGTGGCAT CGGCACCAAC
CACTCGGTGC CACGACTGCA GCAGGGCCAG GGTGCGATCA TCGGCGTCGG TGCCATGGAG
TACCCCGCCC CCTTCCAGGG CACCAGTGAG CAGACGCTCA ACCAGCTCGG CGTCAGCAAG
ATCATGACGC TGACCTCGAC CTACGACCAC CGCATCATCC AGGGCGCGGA GTCGGGCGAG
TTCCTCAAGC GCATCCACGG CCTGCTGCTC GGTGAGGACG GCTTCTACGA CGACATCTTC
ACCTCGCTGC GCATCCCGTA CGAGCCGGTG CGCTGGGTGG AGGACATCCC CGAAGGGGAG
ATCGACAAGA CCGCCCGCGT GCTGAAGCTG ATCGAGGCCT ACCGGACGCG CGGCCACCTG
ATGGCCGACA CCGACCCGCT GAACTACCGC CAGCGCAGGC ACGAGGACCT CGACATCCTG
TCCCACGGCC TGACCTTGTG GGACCTCGAC CGCGAGTTCG CGGTGGGCGG CTTCGCCGGC
AAGGAACGCA TGAAACTGCG TGACGTGCTC GGCGTGCTGC GGGACTCGTA CTGCCGCACG
GTGGGTGTGG AGTACACGCA CATCCTCGAC CCTGACGAGC GCCGCTGGAT CCAGGAGCGG
GTGGAGGTTC CGCACGAGAA GCCGAGCCCG GCGGTCCAGA AGTACATCCT CAGCAAGCTC
AACGCCGCCG AGGCGTTCGA GACGTTCCTG CAGACCAAGT ACGTCGGGCA GAAGCGGTTC
TCGCTCGAGG GTGGCGAGAC CATGATCCCG CTGCTGGACA CGGTGCTGGA CAGGGCCGCC
GAGTACCAGC TCGACGAGGT CGTCATCGGC ATGCCGCACC GTGGCCGGCT GAACGTGCTG
GCCAACATCG TCGGCAAGCC GATCTCGCAG ATCTTCCAGG AGTTCGAGGG CAACCTCGAC
CCCGGCCAGG CGCACGGCTC CGGTGACGTG AAGTACCACC TCGGTGCCGA GGGCAAGTAC
TTCCGCATGT TCGGCGACGG CGAGACGAAG GTGTCGCTGA CGGCGAACCC GTCGCACCTG
GAGACCGTCG ACCCGGTGCT GGAAGGCATC GTCCGGGCCA AGCAGGACCT GTTGGACAAG
GGCGAGCGGG ACTCCGGTGG CTTCAGCGTC ATGCCGGTGC TGCTGCACGG TGACGCGGCG
TTCGCGGGCC AGGGTGTGGT GGCGGAGACG CTGAACCTGG CGATGCTGCG CGGCTACCGC
ACCGGCGGCA CCGTGCACGT GATCATCAAC AACCAGGTCG GGTTCACCAC CGCGCCCGAA
CACGCTCGTT CGTCGCAGTA CGCCACCGAC GTGGCGAAGA TGATCGGCGC GCCGATCTTC
CACGTCAACG GCGACGACCC CGAGGCCGCC TACTGGGTGG CGCGGCTGGC CGTGGACTAC
CGCCAGACGT TCAACAAGGA CGTCGTGATC GACTTGATCT GCTACCGGCG CCGCGGCCAC
AACGAGGGCG ACGACCCGTC GATGACGCAG CCTCGCATGT ACGACGTCAT CGACGCCAAG
CGCAGCGTGC GGAAGACCTA CACCGAGGCG CTCATCGGCC GTGGCGACAT CTCCATGGAG
GAGGCCGAGG CGGCGCTGCG TGACTTCTCC ACCCAGCTCG AGCACGTGTT CAAGGAAGTC
CGGGAGCTGG AGAAGCACCC CATCGCGCCG AGCCCGTCGG TGGAGCAGCG GCAGCAGGTG
CCGGCCCAGG TCCCGACCGC GGTGACCCGC GACGTCATAG AGCGCATCGG CGACGCGTTC
GTCAACCTGC CGGAGGGCTT CACCCCGCAC CCGAGGGTCA AGCCGGTGCT CGAGCGGCGG
CAGAAGATGT CGCGCGAGGG CAACATCGAC TGGGCGTTCG GCGAGCTGCT CGCCTTCGGC
TCGCTGGCGT TGGAGGGACG CCTGGTGCGG TTGTCCGGCC AGGACTCGCG TCGTGGCACG
TTCTCCCAGC GCCACGCGGT GCTGATCGAC CGGAAGACGG GCGAGGAGTT CGCGCCGCTG
CAGCACCTCT CCGAGGACCA GGGCCGGGTC ATGGTCTACG ACTCAGCGCT GTCCGAGTAC
GCGGCGGTGG GCTTCGAGTA CGGCTACTCG GTGGCCAACT CCGAGGCGCT GGTGATGTGG
GAGGCGCAGT TCGGCGACTT CGTCAACGGC GCCCAGACCG TCATCGACGA GTACATCTCG
TCCGGTGAGG CGAAGTGGGG CCAGGTGTCC GACGTGGTGC TGCTGCTGCC GCACGGTCAC
GAGGGTCAGG GTCCCGACCA CACCTCCGGC CGGATCGAGC GGTTCCTCCA GCTCTGCGCG
GAGCACTCGA TGACGGTGAC GATGCCGTCC ACGCCGGCGA ACTACTTCCA CCTGCTGCGC
AGGCACGCCC TGGACGGTGT GAACCGACCG CTGATCGTGT TCACGCCGAA GTCGATGCTG
CGCAACAAGG CGGCGACCTC GGCGGTGGAG GACTTCATCG GTGACTCGAA GTTCCTATCG
GTCATCGGTG AGCAGGAGAT CGCCCCGGAG GACACCCGCA AGGTGCTGCT GACCTCCGGC
AAGCTCTACT GGGAGCTGGT GGAGGAGCGC CGCAAGCGTG GCGCGAACGA TGTGGCGATC
ATCCGGATCG AGCAGTACTA CCCGCTGCCG AAGAAGAAGC TGCGCGCCGA GATGGAGAAG
TACAGCCACG TCGACAAGGT GCTCTGGGTG CAGGAGGAAC CCGAGAACCA GGGTGCGTGG
CCGTTCTTCG GGCTGAACCT GCCGCGCAGG ATGCCCGACG TGTTCCCGCG CCTCGACGTC
GTGGCACGTC GCCCGATGGC CGCGCCGTCG GCGGGTTCTT CCAAGGTGCA CGAGGTGGAG
CAGAAGGCGT TGATCGCCAA GGCTTTCGAG GACTGA
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| Protein sequence | MSSSSPASQF GPNEWLVEEM YDRFLDDPSS VDAAWHEFFA DFQPSQDAQA RSEGAEQKSP
ANGQPATQTA PKQTAPATPT TSPSPKTESV AAPQTTPQGA KTKPATPKSE PPQSTPGSTG
TSATARTAPP KKPSEPERKP LRGVAATIAK NMDASLSVPT ATSVRAVPAK LMADNRIVIN
NHLRRARGGK VSYTHLIGYA MIRALHDFPN MNRHYAVIDG KPHVVTPEHI NLGLAIDMKG
KDGQRSLVVA SIKNCENMTF LQFWQAYEDI VRKARNNKLT ADDFAGTTIS LTNPGGIGTN
HSVPRLQQGQ GAIIGVGAME YPAPFQGTSE QTLNQLGVSK IMTLTSTYDH RIIQGAESGE
FLKRIHGLLL GEDGFYDDIF TSLRIPYEPV RWVEDIPEGE IDKTARVLKL IEAYRTRGHL
MADTDPLNYR QRRHEDLDIL SHGLTLWDLD REFAVGGFAG KERMKLRDVL GVLRDSYCRT
VGVEYTHILD PDERRWIQER VEVPHEKPSP AVQKYILSKL NAAEAFETFL QTKYVGQKRF
SLEGGETMIP LLDTVLDRAA EYQLDEVVIG MPHRGRLNVL ANIVGKPISQ IFQEFEGNLD
PGQAHGSGDV KYHLGAEGKY FRMFGDGETK VSLTANPSHL ETVDPVLEGI VRAKQDLLDK
GERDSGGFSV MPVLLHGDAA FAGQGVVAET LNLAMLRGYR TGGTVHVIIN NQVGFTTAPE
HARSSQYATD VAKMIGAPIF HVNGDDPEAA YWVARLAVDY RQTFNKDVVI DLICYRRRGH
NEGDDPSMTQ PRMYDVIDAK RSVRKTYTEA LIGRGDISME EAEAALRDFS TQLEHVFKEV
RELEKHPIAP SPSVEQRQQV PAQVPTAVTR DVIERIGDAF VNLPEGFTPH PRVKPVLERR
QKMSREGNID WAFGELLAFG SLALEGRLVR LSGQDSRRGT FSQRHAVLID RKTGEEFAPL
QHLSEDQGRV MVYDSALSEY AAVGFEYGYS VANSEALVMW EAQFGDFVNG AQTVIDEYIS
SGEAKWGQVS DVVLLLPHGH EGQGPDHTSG RIERFLQLCA EHSMTVTMPS TPANYFHLLR
RHALDGVNRP LIVFTPKSML RNKAATSAVE DFIGDSKFLS VIGEQEIAPE DTRKVLLTSG
KLYWELVEER RKRGANDVAI IRIEQYYPLP KKKLRAEMEK YSHVDKVLWV QEEPENQGAW
PFFGLNLPRR MPDVFPRLDV VARRPMAAPS AGSSKVHEVE QKALIAKAFE D
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