Gene Svir_30520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30520 
Symbol 
ID8388376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3304231 
End bp3305844 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content68% 
IMG OID644977081 
Productacetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
Protein accessionYP_003134854 
Protein GI257057022 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.805243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTC CTGCTCTCGC CAGCGCTGTC GACACCCGCA GCGAGTCGTA CGCGCGTAAC 
GTCGCGCACC ACACCGAGCT GGTGGCCGAC CTTCGCGCGC GGTTGGCCGC CGTGCGGCAG
GGCGGGCCGG AGAAGGCACG CATCAAGCAC GTCGAGCGGG GCAAACTGCT GCCACGTGAT
CGCGTCGACG CGCTGCTCGA CCCCGGCTCC CCGTTCCTGG AACTGTCTCC GCTGGCCGCG
AACGGCCTCT ACGACGACGA AGCCCCCAGC GCGGGGATCA TCACCGGCGT CGGTCGCGTG
TCCGGTCGGG AATGCGTCAT CGTCGCCAAC GACGCCACGG TCAAGGGCGG CACGTACTAC
CCGATGACGG TGAAGAAGCA CCTGCGTGCG CAGGAAGTGG CCCTGCACAA CAACCTGCCG
TGTCTGTACC TCGTCGACTC GGGGGGCGCG TTCCTCCCCA AACAGGACGA GGTCTTCCCC
GACCGGGAGC ACTTCGGCCG CATCTTCTAC AACCAGGCGA CGATGTCGGC GCGGGGCATC
CCGCAGATCG CCGCGGTCCT CGGCTCCTGC ACGGCCGGGG GCGCGTACGT GCCGGCGATG
AGCGACGAGG CCGTGATCGT CCGCAACCAG GGCACGATCT TCCTCGGCGG CCCGCCGCTG
GTGAAGGCCG CCACGGGCGA GGTCGTGACG GCCGAGGAGC TCGGTGGCGG CGACGTGCAC
GCGCGGCAGT CCGGTGTGAC GGACCACCTC GCCGTCGACG ACGCCGACGC GCTGCGCAAG
GTACGGGCCA TCGTCTCCAC GCTCGGCCCG CGTGCCCCGC GACCGTGGGA CGTGGCGCCC
ACGGAGGAGC CGGTCGTCGA CCCCGACGAG CTGTACGGGG TGGTCCCCGC GGACCCCCGT
ACGCCCTACG ACGTGCGCGA GGTGATCGCC CGCATCGTCG ACGGCAGTCG GTTCACGGAG
TTCAAGAAGG AGTACGGGGC CACGCTCGTC ACCGGTTTCG CCCGGATCCA CGGCCATCCG
GTGGGCATCG TGGCCAACAA CGGAGTGCTG TTTTCCGAGT CGGCGATGAA GGGCGCGCAC
TTCATCGAGT TGTGCGATCG ACGCTCGGTG CCGTTGGTGT TCCTGCAGAA CATCACGGGT
TTCATGGTGG GCCGCGACTA CGAGGCGGGT GGTATCGCCA AGCACGGCGC GAAGATGGTC
ACCGCCGTGG CGTGCGCCAG GGTGCCGAAG TTCACCGTGA TCATCGGTGG TTCGTTCGGT
GCGGGGAACT ATTCGATGTG CGGTCGCGCG TACTCGCCTC GGTTCCTGTG GATGTGGCCC
AATGCGCGGA TCTCGGTGAT GGGCGGGGAA CAGGCCGCGT CGGTGCTCGC GACGGTGCGC
AGGGACGGCT TGGAGGCGCG GGGTCAAAAG TGGTCGGCCG AGGAGGAGGA AGCCTTCAAA
AAGCCCATCC GTGAACAGTA CGAGCGCCAG GGCAATCCGT ATTACTCGAC GGCGCGGTTG
TGGGACGACG GTGTGATCGA TCCGTTGGAC ACCCGCATGG TGCTGGGGCT GGCGTTGTCC
GCCGCCGCGA ACGCGCCACT GGAACCGGTG AACTACGGCG TCTTCAGGAT GTGA
 
Protein sequence
MDAPALASAV DTRSESYARN VAHHTELVAD LRARLAAVRQ GGPEKARIKH VERGKLLPRD 
RVDALLDPGS PFLELSPLAA NGLYDDEAPS AGIITGVGRV SGRECVIVAN DATVKGGTYY
PMTVKKHLRA QEVALHNNLP CLYLVDSGGA FLPKQDEVFP DREHFGRIFY NQATMSARGI
PQIAAVLGSC TAGGAYVPAM SDEAVIVRNQ GTIFLGGPPL VKAATGEVVT AEELGGGDVH
ARQSGVTDHL AVDDADALRK VRAIVSTLGP RAPRPWDVAP TEEPVVDPDE LYGVVPADPR
TPYDVREVIA RIVDGSRFTE FKKEYGATLV TGFARIHGHP VGIVANNGVL FSESAMKGAH
FIELCDRRSV PLVFLQNITG FMVGRDYEAG GIAKHGAKMV TAVACARVPK FTVIIGGSFG
AGNYSMCGRA YSPRFLWMWP NARISVMGGE QAASVLATVR RDGLEARGQK WSAEEEEAFK
KPIREQYERQ GNPYYSTARL WDDGVIDPLD TRMVLGLALS AAANAPLEPV NYGVFRM