Gene Svir_30500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30500 
Symbol 
ID8388374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3301080 
End bp3302237 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID644977079 
Productbutyryl-CoA dehydrogenase 
Protein accessionYP_003134852 
Protein GI257057020 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.262375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT TCAGGTTGGA CGAGGAGTAC GAGGACCTGC GCAACACCGT GCGTGACTTC 
GCGCGGTCCG AGGTCGCCCC GGTGATCGGG GAGTTCTACG AGCGCGAGGA GTTCCCGTAC
GAGATCGTCG CGCGCATGGG CGAGATGGGG TTGTTCGGCC TGCCGTTCCC GGAGGACTAC
GGCGGCATGG GCGGTGACTA TTTCGCGCTG TGCCTGGCGT TGGAGGAGCT GGCGCGGGTC
GATTCGTCGG TGGCGATCAC CCTGGAGGCC GGGGTGTCGC TCGGGGCGAT GCCGATCTAT
CGGTTCGGCA CCGAGGAACA GAAACGGGAG TGGCTTCCCG CGCTGTGCGA GGGCCGGGCG
TTGGGTGCGT TCGGGTTGAC CGAACCCGGC GGTGGTTCGG ATGCGTCGGC CACGCGGACC
ACGGCGACGT TGGACAACGG CGAGTGGGTG GTCAACGGCA GTAAGTCGTT CATCACCAAC
TCGGGCACCG ACATCACCCG GTTGATCACC GTCACGGCTG TGACGGGACA GAAACCGGAC
GGTGGCAAGG AGATCTCCGC GATCATCGTG CCGTCGGGGA CCTCAGGGCT CACGGTGCAG
CCGAAGTACT CGAAGGTCGG CTGGAACGCC TCCGACACGC ATGGGTTGAC CTTCGACGAC
TGTCGGGTCC CCGAGGGGAA CCTCCTCGGG GAACGTGGCC GGGGCTATGC GCAGTTCTTG
TCCATCCTGG ACGAAGGGCG TGTCGCCATA GCCGCGTTGT CGGTGGGATT GGCGCAGGGC
TGCGTGGACG AATGCCTGCG CTACGTCAAG GAACGTGAGG CGTTCGGACG TAAGATCGGC
GAGTACCAGA GCATCCAGTT CAAGATCGCC GACATGGAAC TCCGCACGCA CACGGCGCGG
CTGGCGTACT ACCAGGCGGC GGCGAAGATG CTGCGGGGAG AACGGTTCAA GAAGGAGGCG
GCCATCGCCA AGTTGGCGGC TTCCAACGCC GCGATGGACA ACGCCCGGGA CGCCACTCAG
ATCTTCGGCG GCTACGGGTT CATGAACGAG TACCCCGTGG GTCGTTTCTA CCGCGACGCC
AAGATCCTGG AGATCGGCGA GGGGACGAGC GAGGTGCAGC GCATGCTCAT CGCGCGTGAG
CTGGGCGTGG CGGGCTGA
 
Protein sequence
MIDFRLDEEY EDLRNTVRDF ARSEVAPVIG EFYEREEFPY EIVARMGEMG LFGLPFPEDY 
GGMGGDYFAL CLALEELARV DSSVAITLEA GVSLGAMPIY RFGTEEQKRE WLPALCEGRA
LGAFGLTEPG GGSDASATRT TATLDNGEWV VNGSKSFITN SGTDITRLIT VTAVTGQKPD
GGKEISAIIV PSGTSGLTVQ PKYSKVGWNA SDTHGLTFDD CRVPEGNLLG ERGRGYAQFL
SILDEGRVAI AALSVGLAQG CVDECLRYVK EREAFGRKIG EYQSIQFKIA DMELRTHTAR
LAYYQAAAKM LRGERFKKEA AIAKLAASNA AMDNARDATQ IFGGYGFMNE YPVGRFYRDA
KILEIGEGTS EVQRMLIARE LGVAG