Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30500 |
Symbol | |
ID | 8388374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3301080 |
End bp | 3302237 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977079 |
Product | butyryl-CoA dehydrogenase |
Protein accession | YP_003134852 |
Protein GI | 257057020 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.262375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGATT TCAGGTTGGA CGAGGAGTAC GAGGACCTGC GCAACACCGT GCGTGACTTC GCGCGGTCCG AGGTCGCCCC GGTGATCGGG GAGTTCTACG AGCGCGAGGA GTTCCCGTAC GAGATCGTCG CGCGCATGGG CGAGATGGGG TTGTTCGGCC TGCCGTTCCC GGAGGACTAC GGCGGCATGG GCGGTGACTA TTTCGCGCTG TGCCTGGCGT TGGAGGAGCT GGCGCGGGTC GATTCGTCGG TGGCGATCAC CCTGGAGGCC GGGGTGTCGC TCGGGGCGAT GCCGATCTAT CGGTTCGGCA CCGAGGAACA GAAACGGGAG TGGCTTCCCG CGCTGTGCGA GGGCCGGGCG TTGGGTGCGT TCGGGTTGAC CGAACCCGGC GGTGGTTCGG ATGCGTCGGC CACGCGGACC ACGGCGACGT TGGACAACGG CGAGTGGGTG GTCAACGGCA GTAAGTCGTT CATCACCAAC TCGGGCACCG ACATCACCCG GTTGATCACC GTCACGGCTG TGACGGGACA GAAACCGGAC GGTGGCAAGG AGATCTCCGC GATCATCGTG CCGTCGGGGA CCTCAGGGCT CACGGTGCAG CCGAAGTACT CGAAGGTCGG CTGGAACGCC TCCGACACGC ATGGGTTGAC CTTCGACGAC TGTCGGGTCC CCGAGGGGAA CCTCCTCGGG GAACGTGGCC GGGGCTATGC GCAGTTCTTG TCCATCCTGG ACGAAGGGCG TGTCGCCATA GCCGCGTTGT CGGTGGGATT GGCGCAGGGC TGCGTGGACG AATGCCTGCG CTACGTCAAG GAACGTGAGG CGTTCGGACG TAAGATCGGC GAGTACCAGA GCATCCAGTT CAAGATCGCC GACATGGAAC TCCGCACGCA CACGGCGCGG CTGGCGTACT ACCAGGCGGC GGCGAAGATG CTGCGGGGAG AACGGTTCAA GAAGGAGGCG GCCATCGCCA AGTTGGCGGC TTCCAACGCC GCGATGGACA ACGCCCGGGA CGCCACTCAG ATCTTCGGCG GCTACGGGTT CATGAACGAG TACCCCGTGG GTCGTTTCTA CCGCGACGCC AAGATCCTGG AGATCGGCGA GGGGACGAGC GAGGTGCAGC GCATGCTCAT CGCGCGTGAG CTGGGCGTGG CGGGCTGA
|
Protein sequence | MIDFRLDEEY EDLRNTVRDF ARSEVAPVIG EFYEREEFPY EIVARMGEMG LFGLPFPEDY GGMGGDYFAL CLALEELARV DSSVAITLEA GVSLGAMPIY RFGTEEQKRE WLPALCEGRA LGAFGLTEPG GGSDASATRT TATLDNGEWV VNGSKSFITN SGTDITRLIT VTAVTGQKPD GGKEISAIIV PSGTSGLTVQ PKYSKVGWNA SDTHGLTFDD CRVPEGNLLG ERGRGYAQFL SILDEGRVAI AALSVGLAQG CVDECLRYVK EREAFGRKIG EYQSIQFKIA DMELRTHTAR LAYYQAAAKM LRGERFKKEA AIAKLAASNA AMDNARDATQ IFGGYGFMNE YPVGRFYRDA KILEIGEGTS EVQRMLIARE LGVAG
|
| |