| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30370 |
|---|
| Symbol | |
|---|
| ID | 8388361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3290089 |
|---|
| End bp | 3291501 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977066 |
|---|
| Product | NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| Protein accession | YP_003134839 |
|---|
| Protein GI | 257057007 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.515319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGC TGACGGTGGC GCTGGCGCTG CCTTGGGTCG CGGGAATCGT GTTGGTCGGA
TTCGACGGAC GGCGGCCGAT CATCGCCTGG CTCACGGTGG CCGTGCTCGC CGCGAACCTG
GCGGTCCTGC TCCTGCTCGC GTTCGACGTG CTCACCCGTG GCGACACCCA GCTGGTGACG
GGCGACTGGC CCGCCGGCGT GGGCATCGTG CTGCGGGCCG ACGCGCTGGG GATCACGTTC
GCCCTGCTGT CGGTGTTCGT ACTGCTGATC GCCACCACCG CCGAGGCGAT CAACGGGGTC
CGCGTCCGAA CGTTCCCGGG GCTGGCGGTC CTCCTCTCCG CCGGGTTGAG CGGCCTGTTC
CTCACCTACG ACGTATTCAA CTTCTACGTC TTCTTCGAAC TGTCGATGAC CGTGTCCTAT
GTGTTGACCG CCTACGGGGG ACGTACCCGA CAGCTGCGGG CGGCCTTGGT CTTCACCGCC
GTCAACCTGC TGGGTTCGTT CCTGTTCCTT TTGGCCGTGG CCGGTACCTA CCGGGTGACC
GGAACCCTGT TGATGAGCGA CGTGGCCGCC CACATGGACC AGGTGTCCGA CCACGCCTCC
CTGCTCATCG CGTTGGGTTT CTTCGTCGCC TTCAGCGTCA AGGTGGGACT GTTCCCGTTC
CACTTCTGGT TGCCGACCGT CTACGCCGGT ACGCGGCCCG CCGTGGCCGC CATCCTCAGC
GGCGCCGTCG CCAACATCGG CTCCTACGGG CTGCTCCGAT TCGGCGTGGG CATGTTCGAA
GAACAACTAC GGCTGGCCGC GGTTGTGGTG ATCGTGCTCG GTGCGGCCTC GATCGTCTAC
GGCGCTTTGC TGGCGGTGTC CCGTGGCGAT CCGGCGGAAA TGCTGGCCTA CTCCACGATC
GGGCAGATCG GGTACGTCCT GGTGGCCATT GGAGTCGGCG GGGTCGTCGG GTTGACGGCC
GCGGTGCTCT ACAGCGTGGT CAACGGGTTG AACAAGACAC TGCTGTTTTT GGGCGTCGGC
ATGCGGGGGA AACTCGTCGC CGCCGCTTTC GTGATCGGAG CGTTCAGCGT CGCCGGCATT
CCTCCCGCAG TGGGGTTCAT CGGCAAACTC GAGATGTTCC GCACCGCCAT CGCCGCGTCC
AACCCCACTC TCGTGGTCCT GTTGTTCGTC GGAAGCTCCC TGTCCCTGAT CTACCTGTTT
CAGGTGTATC AGCGCGTCTT CTGGCATAAG AACGCCTCGA CCGGCAATCT CGCGGGCGGT
GGCGCCAGCT CCTGGGCCCC GGAGCGAACC AGCCCGCTGC CGTTGCGGAC GTTGACACTC
GTGCTGGCCC TCATCGTCCT GGCCGCCGGC CTGTGGCCGG AACCCCTACT GCAACTCAGC
GGCAACGCCG CCGACGCATT GATTCGGAGG TAA
|
|---|
| Protein sequence | MTTLTVALAL PWVAGIVLVG FDGRRPIIAW LTVAVLAANL AVLLLLAFDV LTRGDTQLVT
GDWPAGVGIV LRADALGITF ALLSVFVLLI ATTAEAINGV RVRTFPGLAV LLSAGLSGLF
LTYDVFNFYV FFELSMTVSY VLTAYGGRTR QLRAALVFTA VNLLGSFLFL LAVAGTYRVT
GTLLMSDVAA HMDQVSDHAS LLIALGFFVA FSVKVGLFPF HFWLPTVYAG TRPAVAAILS
GAVANIGSYG LLRFGVGMFE EQLRLAAVVV IVLGAASIVY GALLAVSRGD PAEMLAYSTI
GQIGYVLVAI GVGGVVGLTA AVLYSVVNGL NKTLLFLGVG MRGKLVAAAF VIGAFSVAGI
PPAVGFIGKL EMFRTAIAAS NPTLVVLLFV GSSLSLIYLF QVYQRVFWHK NASTGNLAGG
GASSWAPERT SPLPLRTLTL VLALIVLAAG LWPEPLLQLS GNAADALIRR
|
|---|
| |