| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30320 |
|---|
| Symbol | |
|---|
| ID | 8388356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3284756 |
|---|
| End bp | 3285334 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644977061 |
|---|
| Product | phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| Protein accession | YP_003134834 |
|---|
| Protein GI | 257057002 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.418593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAC GAACACTCGG GCTCGTCGCC TCGGCTGCCG GTGGGTTGGA GCGTATCCGG
TCGTCATTGG TGGAACCGGC GATCGCTCGC GGGTGGCGGG TGGCGGTGAC CCTGACCCCG
ACCGCTGGCA CGTGGTTGGA AGCCAATGGG GAGCGGACAC GTATCGAGCA GGTCACCGGT
CTGCCGTGTC GGGTCGCGCC TCGGCTGCCG GATGAGTCGA GTCCACATCC ACCGATTGAC
TGCTACCTGG TGTGTCCGGC CTCGGCGAAC ACGGTCGCGA AGATGGCACT CGGCTTGGCG
GACAACCAGG CGTTGACCAC GGTGTGCGAG GCCATCGGCT CTCGGGTGGT TCCCGTCGTG
GTGTTTCCCC GGATCAACGC GGCCCACGCA CGTCATCCCG CGTGGGATTC CCACATCGGG
GCATTACAAC GTGCTGGGGT GCACCTGTTG CTGGGTGAGG ATTACTGGCC TCTGCACGAG
CCTCGCAGCG CGCCCGGCAA AGACCTTCCC TGGGGCAAGA TCCTCGACAC GATCGACCGG
ATTGTTCCTG CCCATGGAGG ACCGTCCAGC ACGGACTGA
|
|---|
| Protein sequence | MSTRTLGLVA SAAGGLERIR SSLVEPAIAR GWRVAVTLTP TAGTWLEANG ERTRIEQVTG
LPCRVAPRLP DESSPHPPID CYLVCPASAN TVAKMALGLA DNQALTTVCE AIGSRVVPVV
VFPRINAAHA RHPAWDSHIG ALQRAGVHLL LGEDYWPLHE PRSAPGKDLP WGKILDTIDR
IVPAHGGPSS TD
|
|---|
| |