| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30070 |
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| Symbol | |
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| ID | 8388331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3252042 |
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| End bp | 3252878 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977038 |
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| Product | transglycosylase family protein |
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| Protein accession | YP_003134811 |
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| Protein GI | 257056979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3953] SLT domain proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.398467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGACC ACAAGATGTT TGAGCGCGTG AAGAAACTGA TCGCGTTGCA GGCCCCGACC
CGAAACATCT CCACACCTGC GGCGGCGCTC GGCAAGTCCA TGCGCAACGC CGCCCGGAAC
TACGCCTCGG TTGGTGTGGT GGCTCTGTTC GTCAGCGGTG TGGCGAGCCC CGCCGTGCTG
GCGGGAGCGG ACGAGGAAGC CGCTGGGACC GTGTCGATGC AGCCGTCTTC CGTTGTCGCG
CAGCAGAGCG GCTCCGCCGA CAGGGACGCC GTGGTCGGTG GGAAGGTCGT GCTGGACAAG
GGCAACCGCA AGCCGTCCGG CGGCGGCGCT CCGGCCCCGC GCAGCGACGA CCCCGCCGCG
CACGACCGAC ACGCCGATGA GAAGGCGAAG GACGACAAGT CCGCCGAGAA GTCGGCCGAG
TCGGACGCGA AGGAGGCGAG CGGCGGCGGA GCCCAGCCCG CGTCGGCCCC CGAGCCGGTG
GACGAGGTCG ATGGCTGGAT CCGGACGGCG ATCGACGTGA TGCAGGACAA CGGGGTTCCG
GTGTCCGAGA AAGACATCCC GAGCATCCGG ACCGTGATCG AGAAGGAGTC GAGCGGTAAC
CCGCGGGCCA TCAACCTGTG GGACATCAAC GCCAAGCGTG GCATCCCCTC GAAGGGGTTG
ATGCAGACGA TCGACCCGAC TTTCCAGGCC TACAAGCTGC CGGGCCATGA GGACATCTAC
GACCCGGTGT CCAACATCAT CGCCGGGGTC CGGTACACCC TGAGCCGCTA CGGCAGCTTC
GAGAAACACC CCGGCCTCGC TTCGATGGCC TCGGGGGGCA GCTACCGCGG CTACTGA
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| Protein sequence | MADHKMFERV KKLIALQAPT RNISTPAAAL GKSMRNAARN YASVGVVALF VSGVASPAVL
AGADEEAAGT VSMQPSSVVA QQSGSADRDA VVGGKVVLDK GNRKPSGGGA PAPRSDDPAA
HDRHADEKAK DDKSAEKSAE SDAKEASGGG AQPASAPEPV DEVDGWIRTA IDVMQDNGVP
VSEKDIPSIR TVIEKESSGN PRAINLWDIN AKRGIPSKGL MQTIDPTFQA YKLPGHEDIY
DPVSNIIAGV RYTLSRYGSF EKHPGLASMA SGGSYRGY
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