Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29990 |
Symbol | |
ID | 8388323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3243386 |
End bp | 3244237 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977030 |
Product | hypothetical protein |
Protein accession | YP_003134804 |
Protein GI | 257056972 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0490987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.279629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACG GAAAGCAGAA GAAGGGCGCC TCCAAGAAGA AGAGCGCCGT AGCGGCCGCC CGAGGATCAG TGGTCGCCAA GAAGCAGGTT CCGTGGGGCA CCATCATCGC GGTCATAGGC ATCGTCCTGT TGGCCGCCGG CGTGTTCACC TACTACTACG TGGCCTCCGG TGACCAGCGG GCGCAACGGG AACGGGAGGA GGCCGCGGCC AGCTTCGCTC CGAGCGAGGA CAACCCCGAC CCCTCCACCG ACATCGAAGG CGTCGTGACC GAGGAGTACG AGGCCGGTGC CCACGTGCTG CCTCACGAGC GTGTCGCCTA CGACCAGACG CCGCCGTTCG GCGGCCCGCA CGACGGCTAC TGGGCGGCCT GCAACGGCAT CGTGTACCCG GAGCCCGTGC GTAACGAGAA CATGGTGCAC TCGCTCGAAC ACGGAGCGGT GTGGATCGCC TACGACCCCG AGCGGATCCA GGGCGAGGAC TTGGAGCAGC TCAAACTCCG GGTCGAAGGC AAGCCGTTCA CGATGATGTC GCCCTATCCG GGGCTGGACT CCCCCATCTC GCTGCAGGCC TGGGGCCGCC AGCTGAAGGT GGACAGCGTC ACAGACGAGC GCATCGACCA GTTCATCGCC GCGCTGCGGC GCAACCCGAA CACGTACCCG GAGATCGGGG CGTCGTGTGA CGCGCTCGGA CCCGGCATGT TCGACCCGGA CAACCCGCCG CCGTTCAACC CCGATCCGCC GGGGCCGGAC GCCAAGCCGA TGGACTACAA GGGCAGCGCG GGCGCGCGGC AGGGCGACAT GAGCAGCGTG GGTGGCCAGT CGACCCCCGA GGCGCCGCCG GCCGAAGAGT GA
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Protein sequence | MANGKQKKGA SKKKSAVAAA RGSVVAKKQV PWGTIIAVIG IVLLAAGVFT YYYVASGDQR AQREREEAAA SFAPSEDNPD PSTDIEGVVT EEYEAGAHVL PHERVAYDQT PPFGGPHDGY WAACNGIVYP EPVRNENMVH SLEHGAVWIA YDPERIQGED LEQLKLRVEG KPFTMMSPYP GLDSPISLQA WGRQLKVDSV TDERIDQFIA ALRRNPNTYP EIGASCDALG PGMFDPDNPP PFNPDPPGPD AKPMDYKGSA GARQGDMSSV GGQSTPEAPP AEE
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