Gene Svir_29990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29990 
Symbol 
ID8388323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3243386 
End bp3244237 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID644977030 
Producthypothetical protein 
Protein accessionYP_003134804 
Protein GI257056972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0490987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.279629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG GAAAGCAGAA GAAGGGCGCC TCCAAGAAGA AGAGCGCCGT AGCGGCCGCC 
CGAGGATCAG TGGTCGCCAA GAAGCAGGTT CCGTGGGGCA CCATCATCGC GGTCATAGGC
ATCGTCCTGT TGGCCGCCGG CGTGTTCACC TACTACTACG TGGCCTCCGG TGACCAGCGG
GCGCAACGGG AACGGGAGGA GGCCGCGGCC AGCTTCGCTC CGAGCGAGGA CAACCCCGAC
CCCTCCACCG ACATCGAAGG CGTCGTGACC GAGGAGTACG AGGCCGGTGC CCACGTGCTG
CCTCACGAGC GTGTCGCCTA CGACCAGACG CCGCCGTTCG GCGGCCCGCA CGACGGCTAC
TGGGCGGCCT GCAACGGCAT CGTGTACCCG GAGCCCGTGC GTAACGAGAA CATGGTGCAC
TCGCTCGAAC ACGGAGCGGT GTGGATCGCC TACGACCCCG AGCGGATCCA GGGCGAGGAC
TTGGAGCAGC TCAAACTCCG GGTCGAAGGC AAGCCGTTCA CGATGATGTC GCCCTATCCG
GGGCTGGACT CCCCCATCTC GCTGCAGGCC TGGGGCCGCC AGCTGAAGGT GGACAGCGTC
ACAGACGAGC GCATCGACCA GTTCATCGCC GCGCTGCGGC GCAACCCGAA CACGTACCCG
GAGATCGGGG CGTCGTGTGA CGCGCTCGGA CCCGGCATGT TCGACCCGGA CAACCCGCCG
CCGTTCAACC CCGATCCGCC GGGGCCGGAC GCCAAGCCGA TGGACTACAA GGGCAGCGCG
GGCGCGCGGC AGGGCGACAT GAGCAGCGTG GGTGGCCAGT CGACCCCCGA GGCGCCGCCG
GCCGAAGAGT GA
 
Protein sequence
MANGKQKKGA SKKKSAVAAA RGSVVAKKQV PWGTIIAVIG IVLLAAGVFT YYYVASGDQR 
AQREREEAAA SFAPSEDNPD PSTDIEGVVT EEYEAGAHVL PHERVAYDQT PPFGGPHDGY
WAACNGIVYP EPVRNENMVH SLEHGAVWIA YDPERIQGED LEQLKLRVEG KPFTMMSPYP
GLDSPISLQA WGRQLKVDSV TDERIDQFIA ALRRNPNTYP EIGASCDALG PGMFDPDNPP
PFNPDPPGPD AKPMDYKGSA GARQGDMSSV GGQSTPEAPP AEE