Gene Svir_29980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29980 
SymbolargS 
ID8388322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3241627 
End bp3243282 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content68% 
IMG OID644977029 
Productarginyl-tRNA synthetase 
Protein accessionYP_003134803 
Protein GI257056971 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.661681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.169962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCCCG CCGCTCTTGC CGATCTTGTT CGCTCGTCCG CCGTCCAGAT CTTCACCGAC 
CGTGGGCTGG ATCTCAGCAT CTTGCCCGAA CAGGTGACGG TTGAGCGACC CCGCAACCCC
GAGCACGGCG ACTACGCGAC CAATCTCGCG CTTCAGGTGG CGAAGAAGGC AGGGTTACAG
CCGCGCGAGT TCGCGGAGGC GCTGGCCGAG GTGATCTCCT CCGCCCCGGG GATCGCGTCC
GCCGAAGTCG CGGGACCGGG CTTTCTGAAC CTGCGGCTGG CCGCCGACGC GCAGGGCGAG
ATCGTGCGCC AGGTGCTCGA CGCGGGCGCG GACTACGGCC GTGGTGACTC CCTGGTCGGG
CAGAAGATCA ACTTGGAGTT CGTCTCGGCC AACCCCACCG GCCCGATCCA CCTCGGTGGC
ACGCGCTGGG CCGCGGTCGG TGACGCGTTG GGCAGGTTGC TCGCCGCGCA GGGCGCCGAG
GTGACCCGGG AGTACTACAT CAACGACGCC GGGGCCCAGA TCGACCGGTT CGCCGAGTCC
CTCCTCGCCG CCGCCGAGGG CAGGCCCACG CCCGAGGACG GGTACGCGGG CGCCTACATC
ACCGACATCG CCGCCGAGAT CCTGCGTCGC GAGCCGGAGG TGCTCTCCCT ACCCGATGAG
GAGCGGTTCG CGACGTTCAA GCGGCTCGGC GTCGAGCTGA TGCTCGAGGA GATCAAGCAA
AGCCTGAGTG ACTTCGGCAC CCACTTCGAC GTCTGGTTCT CCGAGAAGTC GCTGCACACC
TCCGGTGAGC TGGAGTCGAT CCTGGCCGAC CTCAAGGAAT CGGGCAGCCT GTACCAGAAG
GACGGCGCGT GGTGGTTGCG TTCGACCGAG CACGGTGACG ACAAGGACCG CGTCGTGATC
AAGTCGGACG GCACACTCGC CTACATCGCC GGCGACGTGG CCTACCTGCG CAACAAGCTC
GACCGCGGGT TCGACCTGTG CGTCTACATG CTGGGTGCCG ACCACCACGG TTACATCGCC
CGGCTGAAGG CCGCGGCGGC CGCGATGGGA CACAGCCCCG ACACCGTCGA GGTGCTGATC
GGCCAGCTGG TCAACCTCGT CAGCGGTGGT AAGCCGGTGC GGATGAGCAA GCGCGCGGGC
ACCGTCGTCA CGATGGAGGA CCTCGTGGAG GCCGTGGGCG TCGACGCCGC GCGCTACGAG
TTGTGCCGTT ACTCTGTGGA CGCTTCCCTG GACATCGACC TGGACCTGTT GCGTAAGCGC
ACCAACGAGA ACCCGGTGTT CTACGTGCAG TACGCGCATG CCAGGTTGGC GTCCCTGCAA
CGCAACGCGG CCGAGCTGAA CCTCGAACCG CGCTCCGATG CGGACGTCAG CCTGTTGACC
CATCCGAGGG AGGGCGACCT GATCCGCACG ATCGGGGAGT TCCCCTCGGT GTTGAGGACG
GCGGCCGAGT TGCGTGAACC GCACCGTGTC GCCCGTTACC TGGAATCGCT CGCGTCGGCC
TATCACAAGT TCTACGACGT CGCGCGTGTC CTGCCGCAGG GCGACGAGGA GCCGACCCCG
CTCACGTATG CCCGGCTCGC CCTGTGCGAG GCGACCCGTC AGGTGCTCGC CAACGGGTTG
TCCCTGCTCG GAGTGTCCGC GCCGGAACGG ATGTAG
 
Protein sequence
MTPAALADLV RSSAVQIFTD RGLDLSILPE QVTVERPRNP EHGDYATNLA LQVAKKAGLQ 
PREFAEALAE VISSAPGIAS AEVAGPGFLN LRLAADAQGE IVRQVLDAGA DYGRGDSLVG
QKINLEFVSA NPTGPIHLGG TRWAAVGDAL GRLLAAQGAE VTREYYINDA GAQIDRFAES
LLAAAEGRPT PEDGYAGAYI TDIAAEILRR EPEVLSLPDE ERFATFKRLG VELMLEEIKQ
SLSDFGTHFD VWFSEKSLHT SGELESILAD LKESGSLYQK DGAWWLRSTE HGDDKDRVVI
KSDGTLAYIA GDVAYLRNKL DRGFDLCVYM LGADHHGYIA RLKAAAAAMG HSPDTVEVLI
GQLVNLVSGG KPVRMSKRAG TVVTMEDLVE AVGVDAARYE LCRYSVDASL DIDLDLLRKR
TNENPVFYVQ YAHARLASLQ RNAAELNLEP RSDADVSLLT HPREGDLIRT IGEFPSVLRT
AAELREPHRV ARYLESLASA YHKFYDVARV LPQGDEEPTP LTYARLALCE ATRQVLANGL
SLLGVSAPER M