| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29950 |
|---|
| Symbol | |
|---|
| ID | 8388319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3237378 |
|---|
| End bp | 3238472 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644977026 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_003134800 |
|---|
| Protein GI | 257056968 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.205881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCGC AGGCTTCTTC GGCTGCGGGG CAGGGTGTGC GGCCGGGCTG GCCGGGTGTC
ATCAAGGCGT ATGCCTCGCG CATCCCGATC CCCGAGGGCG CTGAGATCGT CACGCTCGGG
GAGGGCAACA CACCACTGCT GTTCGCGCCG CACCTGTCCG AGCTCACCGG GTGCACCGTG
TACCTGAAGG TGGAGGGTGC CAACCCCACG GGGTCGTTCA AGGACCGGGG GATGACGGTG
GCGATCACCC ACGCCAAGGC GAGCGGGGTG CAGGCCGTCA TCTGCGCCTC CACCGGGAAC
ACGTCCGCGT CGGCGGCCGC CTACGCCACC CGGGCGGGTC TGACCACGGC GGTGCTGGTG
CCGCAGGGCA AGATCGCGAT GGGGAAGATG GCGCAGGCCG TGCTGTACGG GGCACGCATC
CTCCAGATCG ACGGCAATTT CGACGACTGT CTGGAGTTGG CGCGCAAGAT GGCCGCCGAC
TACCCGGTCA CGCTGGTCAA CTCGGTGAAC CCGGTGCGGT TGGTGGGGCA GAAGAGCGCG
GCGTGGGAGA TCTGTGACGC GCTCGGTCAG GCCCCGGACA TCCATTGCCT TCCGGTGGGC
AATGCGGGCA ACATCACCGC CTATTGGGCG GGGTACACCG AGTACGCCGC GGACAAGGTG
ATCAGCACGG TGCCGCGCAT GTTCGGCTTC CAGGCCGCCG GTGCCGCACC GCTGGTGAAG
GGCGAGCCCG TGCCGAACCC GGAGACGGTG GCCACCGCGA TCCGGGTGGG CAGCCCGGCG
TCGTGGGATT CGGCGGTGCA GGCCAAAACG GCCAGCGGTG GGTTGTTCGA GGCGGTGACC
GATGAGCGGA TCCTCGAGGC CTACCGGCTG CTCGCCCGGC GTGAGGGGGT GTTCGTGGAG
CCCGCCTCCG CGACGAGCGT GGCGGGCCTG TTGTTGACGG CGGCCGACGG GCGATTGCCG
AAGGGGTCCA CCGTCGTGTG CACGGTCACC GGACACGGGC TGAAGGATCC CGCGACCGCC
CTGGAGGGCA ACGTGGAGGT CGAGCCGCTC GCCGTCGACC CGAGTGCGGT CGCGGCGGCA
CTGGAACTGT CGTAG
|
|---|
| Protein sequence | MNAQASSAAG QGVRPGWPGV IKAYASRIPI PEGAEIVTLG EGNTPLLFAP HLSELTGCTV
YLKVEGANPT GSFKDRGMTV AITHAKASGV QAVICASTGN TSASAAAYAT RAGLTTAVLV
PQGKIAMGKM AQAVLYGARI LQIDGNFDDC LELARKMAAD YPVTLVNSVN PVRLVGQKSA
AWEICDALGQ APDIHCLPVG NAGNITAYWA GYTEYAADKV ISTVPRMFGF QAAGAAPLVK
GEPVPNPETV ATAIRVGSPA SWDSAVQAKT ASGGLFEAVT DERILEAYRL LARREGVFVE
PASATSVAGL LLTAADGRLP KGSTVVCTVT GHGLKDPATA LEGNVEVEPL AVDPSAVAAA
LELS
|
|---|
| |