Gene Svir_29770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29770 
Symbol 
ID8388301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3214168 
End bp3214893 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID644977008 
Productnitroreductase 
Protein accessionYP_003134782 
Protein GI257056950 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA CACCGTTCGA CGTGCGTGAG ACCGATCGCC TGCTCACCAC GACGAGGTCG 
GTGCGGCGCA GATTGGACTT CGAGCGCCCC GTGCCCCGCG AGGTGATCGA GGAGGCGCTC
GAGGTCGCCG TGCAGGCGCC CACGGCCAAC AACCAGCAGA ACTGGCGATG GGTCGTCATC
ACCGAGGATT CGGTGAAAAA GGAGCTCGCG GAGCTGTTCC ACGTCTCGTG GCGCTTCCAC
CAGAAAGAGG TCTGGACCGC CTCGGGCAGA CGACGCAGAA GCCCGCAGGC GCAGCGCAAC
AACGACTCCG CGGCGACATT GGCCAAGGAC ATCGCGAGGG TGCCGGTGCT CGTCATCCCG
TGCGTACTGG GTAGGCCACC GGACATCGGC GCGATCGACG CCGAGTGGTT GCGTACCCGG
CCCGGCAACG CGGAGACGGC ACGCGACGAC GTCCGCATCG GTGCCATGCG GGCCAGCATC
TTCTACGGCT CGATCTTCCC CGCGATCTGG TCTTTTCAGC TCGCGCTCCG CAGCCGGGGA
CTGGGCAGCA CGATCACGTG CATGCACCTC CCGTTCGAGC GGCGCGTCGG CGAGCTGTTG
GGCATCCCGG CCGGGGTGAC GCAGGTGTGC ATGGTGCCCG TGGCGTACAC GATCGGCACA
GACTTCAAGC CCGCCAAGCG ACACCCGGCC CGATCTCGCA CGAGTTGGGA GAGGTGGCAG
GCATGA
 
Protein sequence
MTATPFDVRE TDRLLTTTRS VRRRLDFERP VPREVIEEAL EVAVQAPTAN NQQNWRWVVI 
TEDSVKKELA ELFHVSWRFH QKEVWTASGR RRRSPQAQRN NDSAATLAKD IARVPVLVIP
CVLGRPPDIG AIDAEWLRTR PGNAETARDD VRIGAMRASI FYGSIFPAIW SFQLALRSRG
LGSTITCMHL PFERRVGELL GIPAGVTQVC MVPVAYTIGT DFKPAKRHPA RSRTSWERWQ
A