Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29770 |
Symbol | |
ID | 8388301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3214168 |
End bp | 3214893 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977008 |
Product | nitroreductase |
Protein accession | YP_003134782 |
Protein GI | 257056950 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCGA CACCGTTCGA CGTGCGTGAG ACCGATCGCC TGCTCACCAC GACGAGGTCG GTGCGGCGCA GATTGGACTT CGAGCGCCCC GTGCCCCGCG AGGTGATCGA GGAGGCGCTC GAGGTCGCCG TGCAGGCGCC CACGGCCAAC AACCAGCAGA ACTGGCGATG GGTCGTCATC ACCGAGGATT CGGTGAAAAA GGAGCTCGCG GAGCTGTTCC ACGTCTCGTG GCGCTTCCAC CAGAAAGAGG TCTGGACCGC CTCGGGCAGA CGACGCAGAA GCCCGCAGGC GCAGCGCAAC AACGACTCCG CGGCGACATT GGCCAAGGAC ATCGCGAGGG TGCCGGTGCT CGTCATCCCG TGCGTACTGG GTAGGCCACC GGACATCGGC GCGATCGACG CCGAGTGGTT GCGTACCCGG CCCGGCAACG CGGAGACGGC ACGCGACGAC GTCCGCATCG GTGCCATGCG GGCCAGCATC TTCTACGGCT CGATCTTCCC CGCGATCTGG TCTTTTCAGC TCGCGCTCCG CAGCCGGGGA CTGGGCAGCA CGATCACGTG CATGCACCTC CCGTTCGAGC GGCGCGTCGG CGAGCTGTTG GGCATCCCGG CCGGGGTGAC GCAGGTGTGC ATGGTGCCCG TGGCGTACAC GATCGGCACA GACTTCAAGC CCGCCAAGCG ACACCCGGCC CGATCTCGCA CGAGTTGGGA GAGGTGGCAG GCATGA
|
Protein sequence | MTATPFDVRE TDRLLTTTRS VRRRLDFERP VPREVIEEAL EVAVQAPTAN NQQNWRWVVI TEDSVKKELA ELFHVSWRFH QKEVWTASGR RRRSPQAQRN NDSAATLAKD IARVPVLVIP CVLGRPPDIG AIDAEWLRTR PGNAETARDD VRIGAMRASI FYGSIFPAIW SFQLALRSRG LGSTITCMHL PFERRVGELL GIPAGVTQVC MVPVAYTIGT DFKPAKRHPA RSRTSWERWQ A
|
| |