Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29710 |
Symbol | |
ID | 8388295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3209038 |
End bp | 3209820 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977002 |
Product | predicted hydrolase or acyltransferase of alpha/beta superfamily |
Protein accession | YP_003134776 |
Protein GI | 257056944 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.519861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCCGT TGACCGTCTT CACCGTCGAA CACCACAACA CTCCGGGGGA GCGTCCTCTC GTCGCCTTCA TGTCCGCGTT GTTCGCGGGC AAATGGATCT GGGACCAGCC GTTCGACGCG CTGTCACGGG CGGGATGGCC GGTGTTGCGT ACGAACGAGG CGATCTGCGC GGTCGAGCCG AAGGTGGCGG GTTCGATCGA ACGGCTCGGT GACGCGTTGC TGGAGGCGTG TGACGCCGTA GGGGCGGACG AGGTCGTCGT CTGCGCGAAC TCGCTGGGCG GGCTGGTGGC CATCGACCTG GCCGGCCGGT TCCCCGATCG GGTCCGCGGC ATCGTGGTCA GCGGCGCGCC CGGGCTCAGC ACCGAGCCGG ACGTGGGGCT GAGCATGGAC CGTCGGGGCA GCGTCAAGCT CGCGACCGAT CAGTTCCGGG AACGCATGTT GAGCGCGTTG TTCCACGGCG AGCCGTTGTT CACCGAGGAG CAGATCCGGC AGACCGGCGA GCTGCTCGCC ACAGGCCCGG CCATGGTGGC GATGGCGCGC AGCCTGCGAG CCACACGCAC GTACCGAGTT CAGTCCGGAT TGGACAAGGT GCGGTGCCCG TCGCTGTACG TGTGGGGCCG GTACGACCGG ATGACGCCGG TGGAGGCCTG GCAGGACCTG GTGCCCCGGT ATCCGGGTAC CGAGTTCGTC GCGGTGGACG ACTGCGGCCA CATCCCGATG GTGGAGCGGG CCGAGGACTA CACCGGGCGG TTGCTCGCGT TCCTCGAACG GGTCGCCGGG TGA
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Protein sequence | MSPLTVFTVE HHNTPGERPL VAFMSALFAG KWIWDQPFDA LSRAGWPVLR TNEAICAVEP KVAGSIERLG DALLEACDAV GADEVVVCAN SLGGLVAIDL AGRFPDRVRG IVVSGAPGLS TEPDVGLSMD RRGSVKLATD QFRERMLSAL FHGEPLFTEE QIRQTGELLA TGPAMVAMAR SLRATRTYRV QSGLDKVRCP SLYVWGRYDR MTPVEAWQDL VPRYPGTEFV AVDDCGHIPM VERAEDYTGR LLAFLERVAG
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