Gene Svir_29710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29710 
Symbol 
ID8388295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3209038 
End bp3209820 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID644977002 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003134776 
Protein GI257056944 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.519861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCGT TGACCGTCTT CACCGTCGAA CACCACAACA CTCCGGGGGA GCGTCCTCTC 
GTCGCCTTCA TGTCCGCGTT GTTCGCGGGC AAATGGATCT GGGACCAGCC GTTCGACGCG
CTGTCACGGG CGGGATGGCC GGTGTTGCGT ACGAACGAGG CGATCTGCGC GGTCGAGCCG
AAGGTGGCGG GTTCGATCGA ACGGCTCGGT GACGCGTTGC TGGAGGCGTG TGACGCCGTA
GGGGCGGACG AGGTCGTCGT CTGCGCGAAC TCGCTGGGCG GGCTGGTGGC CATCGACCTG
GCCGGCCGGT TCCCCGATCG GGTCCGCGGC ATCGTGGTCA GCGGCGCGCC CGGGCTCAGC
ACCGAGCCGG ACGTGGGGCT GAGCATGGAC CGTCGGGGCA GCGTCAAGCT CGCGACCGAT
CAGTTCCGGG AACGCATGTT GAGCGCGTTG TTCCACGGCG AGCCGTTGTT CACCGAGGAG
CAGATCCGGC AGACCGGCGA GCTGCTCGCC ACAGGCCCGG CCATGGTGGC GATGGCGCGC
AGCCTGCGAG CCACACGCAC GTACCGAGTT CAGTCCGGAT TGGACAAGGT GCGGTGCCCG
TCGCTGTACG TGTGGGGCCG GTACGACCGG ATGACGCCGG TGGAGGCCTG GCAGGACCTG
GTGCCCCGGT ATCCGGGTAC CGAGTTCGTC GCGGTGGACG ACTGCGGCCA CATCCCGATG
GTGGAGCGGG CCGAGGACTA CACCGGGCGG TTGCTCGCGT TCCTCGAACG GGTCGCCGGG
TGA
 
Protein sequence
MSPLTVFTVE HHNTPGERPL VAFMSALFAG KWIWDQPFDA LSRAGWPVLR TNEAICAVEP 
KVAGSIERLG DALLEACDAV GADEVVVCAN SLGGLVAIDL AGRFPDRVRG IVVSGAPGLS
TEPDVGLSMD RRGSVKLATD QFRERMLSAL FHGEPLFTEE QIRQTGELLA TGPAMVAMAR
SLRATRTYRV QSGLDKVRCP SLYVWGRYDR MTPVEAWQDL VPRYPGTEFV AVDDCGHIPM
VERAEDYTGR LLAFLERVAG