Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29680 |
Symbol | |
ID | 8388292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3206572 |
End bp | 3207510 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976999 |
Product | ABC-type multidrug transport system, ATPase component |
Protein accession | YP_003134773 |
Protein GI | 257056941 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.619183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTG CGCTCAGCTG CGAGAACCTG GTCAAAAGGT ATGGCGACAA AACGGTGGTC GACCACGTCG GCTTCCGCAT CGACCCCGGC GAGGCCTACG GTCTGCTCGG CCCGAACGGC GCGGGCAAGA CCACGACGAT CTCGATGATC GTCGGCCTGT TGAGACCCGA CGCCGGGTCG GTGCGGGTGA ACGGCATCGA CGTGGCCGAG GACCCGGTGG CCGCCAAACG GCTCGTCGGC TACGTCCCCC AGGAGATCGC CCTCTACCCC GAGCTGAGCG CGCGTGAGAA CCTGCGGTAC TTCGGGCGGC TCTACGGCAT CCCCCGCAGA CGACTCACCG AACGCATCGA GGAGGTGCTG GAGGCCGTCG GACTGACCGA GCGCGGCGAC GACAAGGTGC AGACCTACTC GGGTGGGATG AAGCGCCGCA CCAACATCGG TGTGGCGTTG CTGCACGAGC CGAAGTTGCT GATCCTCGAC GAGCCCACGG TGGGGGTCGA CCCGCAGAGC CGGGCGGCGA TCCTCGACAA CGTCGAACAG CTCGTCGGTG ACGGGATGAG CCTGCTCTAC ACCTCGCACT ACATGGAAGA GGTCGAACGC GTCTGCACGC GGGTCGGCAT CATCGACAAG GGCCGGGTGG TGGCCGACGG CACGAAACGG GAGCTGGTGT CCGAACTCGG CGGCACCGAC ACGGTCGAAC TCGTGCTCGA CGGGGACGTC GAGGCCGCCG CCGAGAAACT GCGTGTCGTG GAGGGGGTCA CCGAGGCCGT GGTCACGGGC CAGAGTTCGG TGCGGCTGTT GGCCGTCGGA GGACGGCACC TGCTGCCGGG GCTTCTCGCC GCCGTGTCCG GGGTGGCTCA GGTGACGGCG GTCGAGGTCA TCGAACCCGA TCTCGAAGCG GCCTTCCTGC ATCTGACCGG CAGCACACTG CGCGACTGA
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Protein sequence | MTAALSCENL VKRYGDKTVV DHVGFRIDPG EAYGLLGPNG AGKTTTISMI VGLLRPDAGS VRVNGIDVAE DPVAAKRLVG YVPQEIALYP ELSARENLRY FGRLYGIPRR RLTERIEEVL EAVGLTERGD DKVQTYSGGM KRRTNIGVAL LHEPKLLILD EPTVGVDPQS RAAILDNVEQ LVGDGMSLLY TSHYMEEVER VCTRVGIIDK GRVVADGTKR ELVSELGGTD TVELVLDGDV EAAAEKLRVV EGVTEAVVTG QSSVRLLAVG GRHLLPGLLA AVSGVAQVTA VEVIEPDLEA AFLHLTGSTL RD
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