Gene Svir_29640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29640 
Symbol 
ID8388288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3202537 
End bp3203187 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID644976995 
Producttranslation factor SUA5 
Protein accessionYP_003134769 
Protein GI257056937 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG TGTACGACTG CAGTGATCCG CACGCCAGAG CCGACGGGCT GAAGGCGGCC 
ATCTCGGCGG TGCGATCGGG CAGGCTTGTG GTCCTGCCGA CCGACACCGT TTACGGGATC
GGTGCCGACG CCTTCGACGC GACGGCCGTG CGGGCTCTGC TCCAGGCCAA GAACCGGGGT
CCCGACATGC CGGTCGGGGT CCTCGTCGGC TCCTGGTCCA CCGTGGACGG GTTGGTGCTG
GGACTGTCCC AGGAGGCCAG GACCCTCATC GAGGCGTTCT GGCCCGGCGA TCTTTCGATC
GTCGTCTCGC ACGCACCGAG TCTGCACTGG AACCTCGGTA CCACGCGCGG CACGGTGATG
CTGCGTATGC CGCTGCACCC GGTGGCGCTC GAAGTACTGC GTGAGGTCGG TCCCATGGCC
GTGTCCAGTG CGAACGTCTC CGGGCAGCCC CCGGCCTCCA CGATGCAGGA GGCGAAGGAA
CAGCTCGGGG AGTCCGTCGC GGTGTATCTC GACGGCGGCC CCAGTGGCGA TCCCGTGCCT
TCCACGATCG TGGACCTCAC GGGGGAGAAA CCGTCCCTGT TGCGTGAGGG CGCCGTCAGC
GCCGAGGCTG TGTCGGAGGC GCTCGGTATG GAGATCGGCC GGGCACAGTG A
 
Protein sequence
MSAVYDCSDP HARADGLKAA ISAVRSGRLV VLPTDTVYGI GADAFDATAV RALLQAKNRG 
PDMPVGVLVG SWSTVDGLVL GLSQEARTLI EAFWPGDLSI VVSHAPSLHW NLGTTRGTVM
LRMPLHPVAL EVLREVGPMA VSSANVSGQP PASTMQEAKE QLGESVAVYL DGGPSGDPVP
STIVDLTGEK PSLLREGAVS AEAVSEALGM EIGRAQ