| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29430 |
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| Symbol | |
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| ID | 8388267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3184170 |
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| End bp | 3185063 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976974 |
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| Product | ectoine/hydroxyectoine ABC transporter solute-binding protein |
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| Protein accession | YP_003134748 |
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| Protein GI | 257056916 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02995] ectoine/hydroxyectoine ABC transporter solute-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAAAC CGAACCTCTC TCGTCGAACA TTGTTGCGGT ACTCGGCCGT CGGACTCGCC
GCGGTGGGCG GTGGGTCGTT GCTCGCCGCG TGCGAGGTGA CGAATCCCGA CACCGGGCAG
GCCGAGGGTG CGGGTATCCA GCAGCGAATC GACTCCGGTC AGCCTGTGCG TATCGCCGTG
GCGAACGAAC CGCCGTACAC GAAGTTGGGT GCCGACGGCG AGTTGTCCGG TGCCTCGCCC
GACGTCACCA AGGCGGTTCT GGAGCGTATG GGTGTCTCCG CCGTCAAAGG AGTCCAGACC
GATTACGACT CGATGATCCC CGGTCTGGGA GCGGATCGGT GGGACATCGT CAGCGCGGGC
CTGTTCATGA ACAAGACCCG CTGCTCGAAG GTCCTCTACG CTTCCCCCGA CATCGTCTCG
ACCGAGTCCT TCGCCGTGCC CGCGGGGAAT CCGAAGGGGC TGACCACGGT CGACGACGTG
AAGCGCTCCG ATGTCGTCGT GGCGGTGCTC GCGGGCAGCT ACGAGTTGAA GACCGCGAAA
TCGCTGGGCA TCGAGGAGGG CAAGCTTCAG ACGTACCCGA AGGCGCCGGA CGCGATGCAG
GGAATGAGCG ACGGGCGGGT GGACGCCGTG TTGCTGCCGA CGTTGACGTT GAGGTCACAC
AAGGAGCAGT ACGGTGGCGA TTTCGAGATC ACCGATCCGT TGGAGTCGTT CCCCGTCACC
GGGGCGGGAG CCGCGTTCCG TAAGTCCGAT TCGGACTTCC ATGCCAAGTT CGACGCGGAA
CTGCGGGAGT TCAAAAAGAC CGAGGAGTTC GCCCGGATCC TGGAGCAATG GGGTTTCGAC
GCCGAGCCCT CCCGTGAGGC GACGACCGAG GAGCTCTGCG CGACCGAAGG CTGA
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| Protein sequence | MSKPNLSRRT LLRYSAVGLA AVGGGSLLAA CEVTNPDTGQ AEGAGIQQRI DSGQPVRIAV
ANEPPYTKLG ADGELSGASP DVTKAVLERM GVSAVKGVQT DYDSMIPGLG ADRWDIVSAG
LFMNKTRCSK VLYASPDIVS TESFAVPAGN PKGLTTVDDV KRSDVVVAVL AGSYELKTAK
SLGIEEGKLQ TYPKAPDAMQ GMSDGRVDAV LLPTLTLRSH KEQYGGDFEI TDPLESFPVT
GAGAAFRKSD SDFHAKFDAE LREFKKTEEF ARILEQWGFD AEPSREATTE ELCATEG
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