| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29420 |
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| Symbol | |
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| ID | 8388266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3183459 |
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| End bp | 3184118 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644976973 |
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| Product | amino acid ABC transporter membrane protein |
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| Protein accession | YP_003134747 |
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| Protein GI | 257056915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGG ACTGGGACTA CACGTTCGAG ATCCTTCCCG AACTGCTCGA GCACTTCGTC
CGATACACCT TGGTCGCCAC GGTCCTCGGT ATCACGGTCG CCGCGGCGCT CGGACTGGTC
TTCGCGATCA TCCGTCGGTC CCGGGTCCCG GTACTGGCGC AGGTGACGAC GGCGTTCATC
GAGTTCGTCC GCAGCACACC GCTGTTGATC CAGCTGTTCT TCCTGTTCTA CGCGCTGCCG
GGAATGGGGA TCACGTTGTC ACCGATGGTC GCGGGTGTCC TCGGCCTCGG CGTGCACTAC
GCGTGCTACT GCGCCGACGT GTACCGGGCC GGCATCGAAG CCGTTCCGAA GGGACAGTGG
GAGGCCTCGC TCGCCCTCCA GCTCCCGGCG CACATCACGT GGCGCAGGGT GGTCCTGCCT
CAAGCCGTGC GTAACGTCCT ACCCGCTTTG GGTAACTACG CCATCGCGAT GTTCAAGGAA
ACGCCGTTCC TGGCACTCAT CACCGTGCCC GAGCTACTGC GCACCGCGCG CACCATCGGC
GGGGACACCT ACGAGTACCT GGAGCCGTTG ACCCTGGCCG GGCTGATCTT CCTCGCGGCC
AGCTATCCGA CGGCGCTGCT GTTGCGCAAG CTGGAAAACC GCATGCAACC CGCGAAATGA
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| Protein sequence | MNWDWDYTFE ILPELLEHFV RYTLVATVLG ITVAAALGLV FAIIRRSRVP VLAQVTTAFI
EFVRSTPLLI QLFFLFYALP GMGITLSPMV AGVLGLGVHY ACYCADVYRA GIEAVPKGQW
EASLALQLPA HITWRRVVLP QAVRNVLPAL GNYAIAMFKE TPFLALITVP ELLRTARTIG
GDTYEYLEPL TLAGLIFLAA SYPTALLLRK LENRMQPAK
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