Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29260 |
Symbol | |
ID | 8388250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3167612 |
End bp | 3168547 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644976957 |
Product | sugar kinase, ribokinase |
Protein accession | YP_003134731 |
Protein GI | 257056899 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.466231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGTA CGGGACTGCT GACCTTCGGC GAGGCGCTCG CGGTGTTCAG CACGCAGTCG GGGAAGCTGC GGCACGCGAG GACGGTCGAC GTGGGTATCG CAGGGTCCGA GGCCATGGTC GCCATCGGTG TGGCCAGGCT GGGCGCACCC GCGGCTTGGG CCGGTCGGCT CGGTGCCGAC GAGCCGGGCG CGATGGTGCT GCTACGACTG CGCGAAGAGG GGGTGGACAC CTCGGCGGTG CGCACGGACC GGCAAGCCCC CACCGGCCTG ATGCTCAAGG ATTTCCGCAA CGCGGACGTC ACTCGGGCGG CCTACTACCG CAACGGCAGC GCGGGGACCC GGCTGTGCCC GGAGGACATC CCCGAGGACC GCATCCGCTC GGCCGGGGTG TTGCACCTCA GCGGCCTCAC CCCCGGCCTC TCCGACTCGG CGGCCAAAGC CGCGTTCGCC GCGGCCGAGG TGGCCAACGA CGAGGGCGTC CCCGTGTCCC TGGACATCGA CTACAGCCAC GCCCTCTGGT ATCCGGAGGA CGCCGCGGAC ATCCTCTACG ACCTCGTGTC ACTGTGCGAC ATCGTGTTCG CCGGGGACGA TGCGGCCCGG CTTCTGGGAC TCGACGGTGA TCCGCAGGAA CTCGCCGCGG GTCTGGCCGA ACTGGGACCG GAACAGGTGA TCGTGGAACT GGGCCCGCGT GGCGCGGTGG CCGAACTGCA CGGTTCCCGG TACGACGTGC CGCACTATCC CGTGCGGTCG GTGGACACGG ACGGCGCCGA CGACGCCTTC GTCGCGGGCT ACCTCGCCGA GTTCTTGGCC GGGGCGTCAC CGGATCGGAG GCTGCGTACG GCCGCCGCAT GCCGCGCCTT CGCCCTCACC GTCCCGGGCG AGTCCACGGG TCTTCCGGAC CGCGAGGAAC TGAAGACCCT CACCCGCACC CGCTGA
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Protein sequence | MSGTGLLTFG EALAVFSTQS GKLRHARTVD VGIAGSEAMV AIGVARLGAP AAWAGRLGAD EPGAMVLLRL REEGVDTSAV RTDRQAPTGL MLKDFRNADV TRAAYYRNGS AGTRLCPEDI PEDRIRSAGV LHLSGLTPGL SDSAAKAAFA AAEVANDEGV PVSLDIDYSH ALWYPEDAAD ILYDLVSLCD IVFAGDDAAR LLGLDGDPQE LAAGLAELGP EQVIVELGPR GAVAELHGSR YDVPHYPVRS VDTDGADDAF VAGYLAEFLA GASPDRRLRT AAACRAFALT VPGESTGLPD REELKTLTRT R
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