Gene Svir_29260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29260 
Symbol 
ID8388250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3167612 
End bp3168547 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID644976957 
Productsugar kinase, ribokinase 
Protein accessionYP_003134731 
Protein GI257056899 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.466231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTA CGGGACTGCT GACCTTCGGC GAGGCGCTCG CGGTGTTCAG CACGCAGTCG 
GGGAAGCTGC GGCACGCGAG GACGGTCGAC GTGGGTATCG CAGGGTCCGA GGCCATGGTC
GCCATCGGTG TGGCCAGGCT GGGCGCACCC GCGGCTTGGG CCGGTCGGCT CGGTGCCGAC
GAGCCGGGCG CGATGGTGCT GCTACGACTG CGCGAAGAGG GGGTGGACAC CTCGGCGGTG
CGCACGGACC GGCAAGCCCC CACCGGCCTG ATGCTCAAGG ATTTCCGCAA CGCGGACGTC
ACTCGGGCGG CCTACTACCG CAACGGCAGC GCGGGGACCC GGCTGTGCCC GGAGGACATC
CCCGAGGACC GCATCCGCTC GGCCGGGGTG TTGCACCTCA GCGGCCTCAC CCCCGGCCTC
TCCGACTCGG CGGCCAAAGC CGCGTTCGCC GCGGCCGAGG TGGCCAACGA CGAGGGCGTC
CCCGTGTCCC TGGACATCGA CTACAGCCAC GCCCTCTGGT ATCCGGAGGA CGCCGCGGAC
ATCCTCTACG ACCTCGTGTC ACTGTGCGAC ATCGTGTTCG CCGGGGACGA TGCGGCCCGG
CTTCTGGGAC TCGACGGTGA TCCGCAGGAA CTCGCCGCGG GTCTGGCCGA ACTGGGACCG
GAACAGGTGA TCGTGGAACT GGGCCCGCGT GGCGCGGTGG CCGAACTGCA CGGTTCCCGG
TACGACGTGC CGCACTATCC CGTGCGGTCG GTGGACACGG ACGGCGCCGA CGACGCCTTC
GTCGCGGGCT ACCTCGCCGA GTTCTTGGCC GGGGCGTCAC CGGATCGGAG GCTGCGTACG
GCCGCCGCAT GCCGCGCCTT CGCCCTCACC GTCCCGGGCG AGTCCACGGG TCTTCCGGAC
CGCGAGGAAC TGAAGACCCT CACCCGCACC CGCTGA
 
Protein sequence
MSGTGLLTFG EALAVFSTQS GKLRHARTVD VGIAGSEAMV AIGVARLGAP AAWAGRLGAD 
EPGAMVLLRL REEGVDTSAV RTDRQAPTGL MLKDFRNADV TRAAYYRNGS AGTRLCPEDI
PEDRIRSAGV LHLSGLTPGL SDSAAKAAFA AAEVANDEGV PVSLDIDYSH ALWYPEDAAD
ILYDLVSLCD IVFAGDDAAR LLGLDGDPQE LAAGLAELGP EQVIVELGPR GAVAELHGSR
YDVPHYPVRS VDTDGADDAF VAGYLAEFLA GASPDRRLRT AAACRAFALT VPGESTGLPD
REELKTLTRT R