| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29150 |
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| Symbol | |
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| ID | 8388239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3160236 |
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| End bp | 3160814 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976946 |
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| Product | uncharacterized membrane protein |
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| Protein accession | YP_003134720 |
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| Protein GI | 257056888 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.77593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCCCCC GCAAGCCGCT GGCGTCGGCC GTGCTGGCGA TCTCCTTCGT GACCCTGCTC
TACCTCGTCG AGCTCATCGA CGTGCTCCTG CCGGTGAACC TCGACGGTTA CGGCATCGTG
GCACGCTCGT TCGACGGTCT CGACGGGATC GTGTGGGCAC CGTTGTTGCA CGCGGATTGG
CAACATCTGT TCGCCAACAC GGGTCCGGTG GTGGTGTTCG CCTTCCTGGC GATGGCCGGT
GGCATCGGAC AGTGGCTGAT GGTGACCGCC ACGATCTGGT TGATCGGTGG TCTGGGGGTG
TGGCTGACCG CACCCGATCT CACCGTCACC GTGGGCGCGT CGGGGCTCGC CTTCGGCTGG
TTGGCGTTCC TGCTCGTTCG TGGCGTGTTC TCGCGAAGTA TCGCCCAGCT CGCGGTGGCT
TTCGTGCTCC TGGCGTTGTG GGGCGGCATG TTGTGGGGGG TGTTCCCCGG CACGCCCGGT
GTCTCCTGGC AAGGTCACCT GTTCGGCGCG CTGGGCGGGG TCCTCGCGGC TTGGCTCGTG
GCGAGGGCGG ACAGGTCGAG GTCGGCGGTC TCATCATGA
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| Protein sequence | MLPRKPLASA VLAISFVTLL YLVELIDVLL PVNLDGYGIV ARSFDGLDGI VWAPLLHADW
QHLFANTGPV VVFAFLAMAG GIGQWLMVTA TIWLIGGLGV WLTAPDLTVT VGASGLAFGW
LAFLLVRGVF SRSIAQLAVA FVLLALWGGM LWGVFPGTPG VSWQGHLFGA LGGVLAAWLV
ARADRSRSAV SS
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