Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29140 |
Symbol | |
ID | 8388238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3159418 |
End bp | 3160215 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976945 |
Product | glutamate racemase |
Protein accession | YP_003134719 |
Protein GI | 257056887 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.818975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGG CCAGTTCGAA CGCTGCTCCG ATCGGGATCT TCGACTCCGG CGTCGGTGGG TTGACGGTCG CGCGCGCCGT GGCCGATCAA CTCCCCGCCG AACGCCTCCG TTACGTGGGG GACACCCTGC ACGCGCCTTA CGGCCCGTTG CCCATCGCCC GCGTGCGGGA ACTGGCGTTG CGGGCCCTCG ACGGTCTCGT CGCCGACGGG GTGAAGGCCC TCGTCATCGC CTGTAACACC GCATCGGCGG CCTGCCTGCG CGACGCCAGG GAACGCTACG ACATCCCGGT GTTCGAGGTC GTACTCCCGG CGGCGCGGCG AGCCGTGGCG ACGACCCGTA ACGGTCACGT CGGACTCATC GGAACCGAGG GCACGGTGCG GTCCCGCGCC TACGACGACG CCTTGGCCGC CACCGGGGTC CGGCTCAGCA GCGTGGCGTG TCCCCGGTTC GTCGAGTTCG TCGAGCGGGG TGTCACCTCC GGACGACAGA TCCTCGGGCT GGCCCAGGGC TACCTCGAAC CGCTGACCCG TGCGGACGTC GACACGCTGA TCCTCGGCTG TACGCACTAT CCGTTGCTGA CAGGTGTCCT GCAGACCGTC ATGGGGCCGG ACGTGACGTT GGTGTCCAGT GCTGAGGAGA CGGCCAAGGA CGTCGTTCGT GTCCTCACCG AGCTGGATCT GTTGGCCGAC CGTGACGAGC CGCCGGAGCA CGAGTTCATC GCCACCGGGC CCGCGGAGCC GTTCACCAAG TTGGCGCGTC GGTTCATGGG GCTCGGCACA GTGCTCGCCG CCACGTGA
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Protein sequence | MTTASSNAAP IGIFDSGVGG LTVARAVADQ LPAERLRYVG DTLHAPYGPL PIARVRELAL RALDGLVADG VKALVIACNT ASAACLRDAR ERYDIPVFEV VLPAARRAVA TTRNGHVGLI GTEGTVRSRA YDDALAATGV RLSSVACPRF VEFVERGVTS GRQILGLAQG YLEPLTRADV DTLILGCTHY PLLTGVLQTV MGPDVTLVSS AEETAKDVVR VLTELDLLAD RDEPPEHEFI ATGPAEPFTK LARRFMGLGT VLAAT
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