| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29060 |
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| Symbol | |
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| ID | 8388230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3153347 |
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| End bp | 3154591 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976937 |
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| Product | amino acid-binding protein |
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| Protein accession | YP_003134711 |
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| Protein GI | 257056879 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.987763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.567165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGAT CGGCGGTCTT GCTGAGCGCG ATCGCTCTCG TGCTCACCGC GTGCGGCGGT
GGGGGAGCCG GGCGAGGGGG TGGCGGCATC GGCGACGGTG GCGATGGCGT GCTGAACCTG
GGGTACGTGC TGCCGGAGAC GGGCCAGCTC GCTTCCTTGG GGGCGCCGCA GATCGAGTCG
GTGAAGCTCG CGATCGAGGA GATCAACGAC GCGGGTGGTG TGCTCGGTCA GCCGATCCCC
GAGGCGGTGT CGACGGATGA GGGCGGACAG CCGAAGGTCG CTGTGCGCTC GGCAGGTGAG
GTGCTGTCGA GGGGCGTGGA CGCGGTCATC GGTGCCGCGG CGTCGAGTAT GTCGCTCGCG
ATCATCGACA ACGTGACCGG TTCGGGTGTG GTGCAGTGTT CGGCTTCCAA CACTGCCGCC
ACCTTCACCG ACTACCCCGA CAGCGGTTTG TACTTCCGCA CCGCCCCGAG CGACAACCTG
CAGGCCGCCG CGCTCAGCAA GGTGATCACC GGCGACGGTC ACGAGCGGGT CGCCGTCGTG
GCCCGGGACG ACGACTACGG TCGTGGGCTG CTGGAGTCGA CCACCAAGGC GCTGGAGTCC
TCGGGTGCCA CCGTGGTGCT GGGGGAGACC TACGCTCCCG AGTCCGAGAG TTTCGACCAG
CTCACCCGAA AGCTTCGAGA TGCCGATCCG GACGCGGTGG TGGTCGTGGC GTTCGAGGAG
GGCGCCAAGG TGCTGCAGGC CATGATCGAA GCCGGGGTGG GGCCTCGGGA CCTCGGCGTC
TACGGTGCCG ACGGTCTCCG TAACACCGAG TTGCCGGAGA TGGTGTCGGC GGACGATCGG
GGAGCGCTCG CCGGTATGAA GGGCACGGCA CCGACGGCGG ACAACGACGA ATACCGCGAA
CGACTGCGGA AGTTCGCTCC CGACCTGCGG GAGATCCAGT TCGCGCCGCA GGCCTACGAC
TGCGTGACGA TCATCGCCTT GGCCGTTGAG GCCGCCCAGT CCGACGATCC GACGGTGTTC
GCCGCGGAGA TCAACCGGGT CACACGGGAC GGCGAGAAAT GCACGTCGTT CGCCGAGTGC
AAGAAGTTGC TCGACCGCGG TGAGGACATC GACTACGACG GTGTCAGCGG GCCACTCGAA
TTCACGGAAC AGGGCGAGCC CGACAAAGGG GTTTTCGACG TCTACGCCTA CGACGAGTCG
GGTGAACTGC AGGTCGTGGG TACCCGGGAG GAATCGAGCA ACTGA
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| Protein sequence | MRRSAVLLSA IALVLTACGG GGAGRGGGGI GDGGDGVLNL GYVLPETGQL ASLGAPQIES
VKLAIEEIND AGGVLGQPIP EAVSTDEGGQ PKVAVRSAGE VLSRGVDAVI GAAASSMSLA
IIDNVTGSGV VQCSASNTAA TFTDYPDSGL YFRTAPSDNL QAAALSKVIT GDGHERVAVV
ARDDDYGRGL LESTTKALES SGATVVLGET YAPESESFDQ LTRKLRDADP DAVVVVAFEE
GAKVLQAMIE AGVGPRDLGV YGADGLRNTE LPEMVSADDR GALAGMKGTA PTADNDEYRE
RLRKFAPDLR EIQFAPQAYD CVTIIALAVE AAQSDDPTVF AAEINRVTRD GEKCTSFAEC
KKLLDRGEDI DYDGVSGPLE FTEQGEPDKG VFDVYAYDES GELQVVGTRE ESSN
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