| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29050 |
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| Symbol | |
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| ID | 8388229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3152861 |
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| End bp | 3153064 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644976936 |
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| Product | cold-shock DNA-binding protein family |
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| Protein accession | YP_003134710 |
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| Protein GI | 257056878 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.415515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.771728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAAG GAACCGTGAA GTGGTTCAAC AGTGAGAAGG GCTTCGGTTT CATCGCCCCC
GATGGCGGAG GCGCCGACGT GTTCGTGCAC TACAGCGAGA TCGACGGACG GGGTTTCCGC
AGCCTCGAAG ACGGCCAGCG AGTGGTCTTC ACCGTCGGTC AAGGCGCCAA GGGGCCCCAG
GCCACAGGAG TGCGCACACT CTGA
|
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| Protein sequence | MAEGTVKWFN SEKGFGFIAP DGGGADVFVH YSEIDGRGFR SLEDGQRVVF TVGQGAKGPQ
ATGVRTL
|
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