Gene Svir_28930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28930 
Symbol 
ID8388217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp3144426 
End bp3145043 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID644976924 
Producttranscriptional regulator 
Protein accessionYP_003134699 
Protein GI257056867 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.218384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACGT CTGGAAAGCC CCCTGCGCGG CGCAAACGGA TGCCGCGCGC CGAACGCGAG 
CGGCAGATGA TCGAGGTCGC CGAAAGCGTG TTCGCCGAAC GCGGCTACGC CGCCGCGTCG 
ATGGACGAGA TCGCCGAACG GGTCGGCGTC TCGAAACCGA TGCTGTACGA GTACTTCCAG 
TCGAAGGAAG GCCTACTGCT CGCCTGCATC CAGGCCGCCC GCGCGGAGCT ACGCGAGGCC 
ACCGAGAAGT CCGTGCTGGG CACGACAACG GCGGAAGACG CGCTCCGCCA GGGCCTTTTG 
GCGTTCTTCA CCTTCGCGCG CGACCGCAGG CAGGCGTGGT CGCTGCTGCG CCACGAGATG 
AGCCTGATCG GCACCTCGGC CGCCGAGGAG CTCGAAGCCA CCCGTCGGCA ACAGACCGAC 
CTGATCGCGC ACCTCATGAG CAGCTACCTG AACGTCTCGG ACCTCGCACT CACGCAGGCG 
ATGGCGGAGT TCGTGGTCGG CGGCTGTGAA CGGCTGGCCA TCTGGTGTGA GCAAAACGAG 
GAAATCACAC CGATTGCCGC AACGGACTAT GCCATGAACC TGCTGTGGGG CGGCCTCCGT 
CACCTCTCGC AGCACTGA
 
Protein sequence
MNTSGKPPAR RKRMPRAERE RQMIEVAESV FAERGYAAAS MDEIAERVGV SKPMLYEYFQ 
SKEGLLLACI QAARAELREA TEKSVLGTTT AEDALRQGLL AFFTFARDRR QAWSLLRHEM 
SLIGTSAAEE LEATRRQQTD LIAHLMSSYL NVSDLALTQA MAEFVVGGCE RLAIWCEQNE 
EITPIAATDY AMNLLWGGLR HLSQH