Gene Svir_28790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28790 
Symbol 
ID8388203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3125585 
End bp3126685 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID644976910 
ProductZn-dependent alcohol dehydrogenase, class III 
Protein accessionYP_003134685 
Protein GI257056853 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.197382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA CCGCTGCTGT CGCCCGCGAA CGACGCGAAC CGTTGCTCAT CGAGGAACTC 
GAACTCGATG AACTCCGACC CGATGAGGTC CGCGTCCGGA TGGTCGGTTC CGGCATCTGT
CGCACCGACG CCGTCGCCCG GGACGGGATC TATCCGGTCC CGATGCCCTC GGTCTTCGGG
CACGAAGGGT CGGGTGTCGT CGAGGAGGTC GGGTCCCGGG TTCGGAACGT CAGGGTCGGC
GACCACGTCG TCCTCGGTCC CTCCTTCTGC GGACGCTGCG AGTACTGCCG CGACGGGGAA
CCGATGTACT GCGAGAACGC CTACCGGGAG ATGTTCGGCT GCCGACGTCG CGACGGCACC
ACCGCCTTCA GCAAGAACGG CGAGAAAGTG GGTTCCCACT ACTTCGGCCA GTCCTCCTTC
GCCACGTACT CCAACGTCGC GGAGAACAGT GTCGTCGTCG TGGACAAGGA CGCACCGCTG
GAATTGCTCG GCCCGCTCGG CTGCGGCCTC ATGACCGGCG CGGGAGCCGT CCTCAACGAG
ATGCGTCCCG AACCCGGATC CTCGATCGCC GTCTTCGGCA CCGGCGCGGT CGGCTTCGCC
GCGTTGATGG CCGCCGCGGC GGCGTCGTGC ACCACCGTCA TCGGCATCGA CGTCCACGAC
TCCCGGCTGG AACTCGCCCG CCGGCTCGGT GCGACCCACA CCGTCAACCC CCGCACCCAC
GATCTTCGAA CCGAGCTGAG GAAGATCACG GGCGGCAGGC GGGTGAACTA CGCGCTGGAC
ACCACCGGTG ATCCCGCCGT CCTCCGGGCC GCCGCGGACG TACTCGGCAA ACGCGGCGAA
CTCGTCGCCG TGGGAGCCGC GACACCGGGA ACCGAGGTCA GCTTCGAGAT CGGCAACTCG
CTGCTCAAAG GCTGGACCTT CAAAACCGTC GTCGAAGGCT CCTCGGTGCC ACAGACCTTC
ATCCCCCGCC TGGTGAGCCT GTGGAAACAA GGCAGGTTCC CGTTCGACGA ACTCGTCAGG
ACCTACTCGC TCCAGGACAT CAACCAGGGC TTCGCCGACT CCGAGTCAGG AAAGACCGTC
AAACCGGTCC TCGTGTACTA G
 
Protein sequence
MIVTAAVARE RREPLLIEEL ELDELRPDEV RVRMVGSGIC RTDAVARDGI YPVPMPSVFG 
HEGSGVVEEV GSRVRNVRVG DHVVLGPSFC GRCEYCRDGE PMYCENAYRE MFGCRRRDGT
TAFSKNGEKV GSHYFGQSSF ATYSNVAENS VVVVDKDAPL ELLGPLGCGL MTGAGAVLNE
MRPEPGSSIA VFGTGAVGFA ALMAAAAASC TTVIGIDVHD SRLELARRLG ATHTVNPRTH
DLRTELRKIT GGRRVNYALD TTGDPAVLRA AADVLGKRGE LVAVGAATPG TEVSFEIGNS
LLKGWTFKTV VEGSSVPQTF IPRLVSLWKQ GRFPFDELVR TYSLQDINQG FADSESGKTV
KPVLVY