Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_28770 |
Symbol | |
ID | 8388201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3123800 |
End bp | 3124999 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644976908 |
Product | hypothetical protein |
Protein accession | YP_003134684 |
Protein GI | 257056852 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.132574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCTTG TGGGGCGCGT ACGTGGCCGT TTGGCACGAT CGAGTGGTCG TTGGGTCTCG TTTCTGCTGG CTGCGATCGT CGTCACGGGA TGTACTTCGA GCGCCGCGGA AGGCGGGCCG TCCTCCCCTG CCACGACCTC CAGCGAACCC CCGAAGCCGG TGTTGTTGGC GCTGTCGGTG TCCGATGACG AGGAGGATGT CGAACCGGGA CAGCCCGTGA CGGTGCGCGC CGAGTACGGT GCCATCACCA AGGCCTCGTT GATCGGCAAA CACGGCACAC ACGTCAAGGA CGACCTACGG TCGGACGGCA CGTTCTGGAC CACCACCGAG CCCCTCGGCT ACGGCAAGAC CTACACGCTC ACCGTCGAGG CCAAGGGGGA GGACGGCAAG ACCGTCACCG AGGAGTCGAC GTTCACCACC GCGACCCCCG ACCGCACCGT CGCCGTGTCC ATCAACGTGT GGGACGACGA GACCGTGGGC GTCGGCATGC CGCTGATCTT CACCTTCACC GGCCCGGTGC CCGACCGGGA CGCCGCGGAG GACGCGATCA CCATCACCGC CGACCCCGAA ACGGAAGGTG ATTTCCGCTG GTTCGGTGAC AGCCAGGTGA TCTGGCGGCC GAAGGAGTAC TGGGAGCCCG GAACCGAGGT GACCATCGAC GCCGAGATCT ACGGCAAGGA CTTCGGCGAG GGCACCTTCG GCGCCGAGGA CAAGACGGTG AGCTTCACCG TGGGGGACAA ACTCGTGGCC GTCGCCGACG GCAAGAGTCA CAAGCTGACG GTGTCGATCA ACGACAAGAA GGTGAAGACG ATGCCCATCT CCATGGGCAA ACCGTCGACG CCCACCCCCA AGGGCATCTA CACCGTCATG AGCGAGCACA ACTGGTACAC CATGGACTCC GGCACCTACG GCGTCCCCGC GGACAGTCCC GGCGGCTACC GCCTCGACGT CGAGTACGCG GTGAGGTTGT CCAACAGCGG TATCTTCTAC CACTCCGCGC CCTGGTCACT GGGCGATCAG GGACGGACCA ACGTCAGCCA CGGCTGCATC AACCTCTCCA CGGAGAACGC CGCCTGGTTG ATGAACAAGA GCAACCGCGG TGACCTGTTT GAGGTCCGCA ACAGCGGAGG ACCCGAGCTC GACCCCACGG ACGGCTGGAG TGTGTGGCAG CTGTCGTGGG AGGAATGGCG GAGCCAGTAG
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Protein sequence | MVLVGRVRGR LARSSGRWVS FLLAAIVVTG CTSSAAEGGP SSPATTSSEP PKPVLLALSV SDDEEDVEPG QPVTVRAEYG AITKASLIGK HGTHVKDDLR SDGTFWTTTE PLGYGKTYTL TVEAKGEDGK TVTEESTFTT ATPDRTVAVS INVWDDETVG VGMPLIFTFT GPVPDRDAAE DAITITADPE TEGDFRWFGD SQVIWRPKEY WEPGTEVTID AEIYGKDFGE GTFGAEDKTV SFTVGDKLVA VADGKSHKLT VSINDKKVKT MPISMGKPST PTPKGIYTVM SEHNWYTMDS GTYGVPADSP GGYRLDVEYA VRLSNSGIFY HSAPWSLGDQ GRTNVSHGCI NLSTENAAWL MNKSNRGDLF EVRNSGGPEL DPTDGWSVWQ LSWEEWRSQ
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