| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28750 |
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| Symbol | |
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| ID | 8388199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3121621 |
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| End bp | 3122490 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976906 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_003134682 |
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| Protein GI | 257056850 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0943352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.087916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACA TCACGCGGAT CGGCGTGATC GGCGCAGGGT TGATGGGATC GGGAATCGCG
GAGGTCGCCG CCCGGGCCGG CCGCGACGTG GTCGTCGTCG AGGCCAACGC CGCCGCGGCG
GACGCCGGCC GCGAACGGAT CGAGAAGTCC CTCGCCCGGG GCGTCGAGAA GGGTAAGTTG
TCCGCCGAGG ATCGGGACGC CGCTCTCGGC CGTCTGACGT TCACCACCGA CATGGAAGCC
TGCTCCGATC GGGAGCTGGT GGTCGAGGCG ATCGCCGAGA ACGAGGCCCT CAAGCTCGAG
GTGTTCGGCA AGCTGGACCG GATCGTGCAG AGCAAGGACG CCATCCTCGC GTCCAACACC
TCGTCGCTTC CGATCATGCG GTTGGCGATG GCCACCCAAC GGCCGGAGTA CGTGGTCGGG
CTGCACTTTT TCAACCCGGT CCCGGTGCAG AAACTCGTCG AACTGATCCC GTCGCTGCTC
ACCGGCGAGG AGACCGCCAA ACGGGCGGAG GCGTTCGCCT CCGAGGTCCT CGGCAAGACC
GTCATCAAGG CACCGGACCG TGCGGGCTTC GTCGTCAACG CGCTTTTGGT CCCCTACCTG
CTCTCGGCCA TCCGCATGGT GGAGGCCGGC CACGCGACTC CGGAGGACAT CGACAACGGC
ATGGTGCTCG GCTGCGCCCA CCCGATGGGT CCGCTGCGGC TGACCGACCT CGTGGGGCTC
GACACCACCA TGGCCGTCGC CGAGTCGATG TACGCGGAAT ACAAGGAGCC CCTCTACGCC
CCGCCACCTC TGCTGCGCCG CATGGTCGAG GCCGGGCTCT ACGGCAAGAA GTCGGGTCGC
GGCTTCTACG ACTACACCCG GGGAGAGTGA
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| Protein sequence | MGDITRIGVI GAGLMGSGIA EVAARAGRDV VVVEANAAAA DAGRERIEKS LARGVEKGKL
SAEDRDAALG RLTFTTDMEA CSDRELVVEA IAENEALKLE VFGKLDRIVQ SKDAILASNT
SSLPIMRLAM ATQRPEYVVG LHFFNPVPVQ KLVELIPSLL TGEETAKRAE AFASEVLGKT
VIKAPDRAGF VVNALLVPYL LSAIRMVEAG HATPEDIDNG MVLGCAHPMG PLRLTDLVGL
DTTMAVAESM YAEYKEPLYA PPPLLRRMVE AGLYGKKSGR GFYDYTRGE
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