| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28730 |
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| Symbol | |
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| ID | 8388197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3118646 |
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| End bp | 3119614 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976904 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_003134680 |
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| Protein GI | 257056848 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.716483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0947669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAA CCATCAACAC AGTCACTGTC GTGGGTGCCG GCTACATGGG AGGAGGGATC
GCGCAGAGCC TCGCCCTCGC CGGAATGGAC GTCCAGATCA TCGACACCGA CCCCGACACC
ACGGCCAAAG GGCTGGAACG GCTGCTGAAG GAGGCCCAGG AGTTCGAGGA CCAGGGCCTC
TACGAACCGG GAAGCACCGA GACGATCCGG AAGAACCTGC GTGCCGGGAC GAGCCTCGAG
CAGGCGGTGT CCGATGTGGA CTTCATCGAA GAGGCCGTCT TCGAGGTCGT GGACGTGAAG
AAGGAAGTGC TCGCCGCCAT CTCCGAGCAC GCGCGTCCCG ACGCCATCAT CGGCACCAAC
ACCTCCACGA TCCCGGTCCA CGTCCTGGCG CCCGCGGTGC GGAATCCGGA GCGGTTTTTG
ACCGTCCACT TCTCCAACCC CGCCCCGTTC ATCCCGGGTG TCGAGCTCGT CGCGGGTGAG
GCCACGACCC CGGAGGTCAT CGAGGCCGTC AAGGACGTGC TGGCACGGGC CGGCCGCGAG
GGGGCCCAGG TGGCGGACAC CCCCGGCATG GTGCTGAACC GTCTCCAGTA CGCCCTGCTG
AAGGAGGCGA CCTCGATCGT CGAGGAGGGC GTGGCGACGC TCGAGGACGT CGACACGATC
GTGCGTACCA CCTTCGGGTT CCGGCTCGGC TTCTTCGGTC CGTTCGCCAT CGCCGACCAG
GCCGGCCTCG ACGTCTACGT GAACTGCTTC AAGACCTTCG AGGAAGCCTA CGGCTCGCGC
CTTGCGACCC CGCAGATGCT CAAGGAGGCG GTCGAGGCCG GTCGTCTGGG CGTGAAGAAC
GGCAAGGGAC TCACCGGGGA CTTCGACGAG GAGACCAAGG CCGCTCTCAT CGCCTACCGC
AACAAGGCGT ACTCCCGGAT GGGAGAGCTG CTTCGGGAAC TCGGCCCCGC CCCGCGGCCC
AAGAAGTAG
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| Protein sequence | MTRTINTVTV VGAGYMGGGI AQSLALAGMD VQIIDTDPDT TAKGLERLLK EAQEFEDQGL
YEPGSTETIR KNLRAGTSLE QAVSDVDFIE EAVFEVVDVK KEVLAAISEH ARPDAIIGTN
TSTIPVHVLA PAVRNPERFL TVHFSNPAPF IPGVELVAGE ATTPEVIEAV KDVLARAGRE
GAQVADTPGM VLNRLQYALL KEATSIVEEG VATLEDVDTI VRTTFGFRLG FFGPFAIADQ
AGLDVYVNCF KTFEEAYGSR LATPQMLKEA VEAGRLGVKN GKGLTGDFDE ETKAALIAYR
NKAYSRMGEL LRELGPAPRP KK
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