| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28720 |
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| Symbol | |
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| ID | 8388196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3117793 |
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| End bp | 3118572 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976903 |
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| Product | dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein |
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| Protein accession | YP_003134679 |
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| Protein GI | 257056847 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.382061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0594101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGGA CCAGCACCGG AGCCTCCGAG GCCGCCACAG CGATCGTGAC CGGCGCCGGC
GCGCAGCGCG GCATCGGTCG CGCCGTCGCC CGCAAACTCG CGGAACAGGG TTGGGCCCTC
GCCCTCGTGG ACCTCGACGA GGAAGGAGTC CGGGACGCAG CACAACAGCT GCGCCGGGAG
GGCTTCCAGG CCGTCGCGGC CCCGGCCGAC GTCAGTGATC CCGACTCGGT CGCGGCCTGC
TTCTCGGTCA TCGACAAGGA GCTGCCACCG GTACGCGCAC TCGTCAACCT GGCGGGGATC
CCCTCACCGG TACCGCTTCT CGAGATCAGC CTCGAGGAGT GGGAGCGTGT GCTGGCGGTC
AACGTCACCG GGAGCCTGCT CATGCTCAAG GAGGCGACCC GGCGGATGAT CGACAACGCC
CGGGGAGGAC GAGTGGTCAA CACCTCGTCC ATCACGGCCT TCGACGGCGG TGGCACCTTC
TCCAAGGGCG CCTATGCCGC GGCGAAGGCA GCGGTCCTGG GGCTCACCCG GGGCGCCGCA
CGCGAACTGG GCGAGCACGG CATCACGGTC AACGCCATCG CCCCGGGTCC CATCGACACC
GACATCATGG GCGGGACCCT GACCGAGGAA CGCAAGGCGG CGATGGCGGC CAACATCCCG
GTGGGCCGCG TCGGCCAGCC GGACGAAGTC GCCGCCCTCA TCGCCTTCCT CCTCTCCGAC
GAGGCGGGCT TCATCTCGGG TGCCACCTAC CAAATCGACG GTGGGAGGTA CATGCACTGA
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| Protein sequence | MSRTSTGASE AATAIVTGAG AQRGIGRAVA RKLAEQGWAL ALVDLDEEGV RDAAQQLRRE
GFQAVAAPAD VSDPDSVAAC FSVIDKELPP VRALVNLAGI PSPVPLLEIS LEEWERVLAV
NVTGSLLMLK EATRRMIDNA RGGRVVNTSS ITAFDGGGTF SKGAYAAAKA AVLGLTRGAA
RELGEHGITV NAIAPGPIDT DIMGGTLTEE RKAAMAANIP VGRVGQPDEV AALIAFLLSD
EAGFISGATY QIDGGRYMH
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