| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28670 |
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| Symbol | tpiA |
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| ID | 8388191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3112647 |
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| End bp | 3113399 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976898 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_003134674 |
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| Protein GI | 257056842 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.887125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0357824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCACCA GCTGGAAGAT GAACAAGACG CTGGCGCAGG CGCGTGACTA CACCGTCCGG
CTCGTCAAGG AGTTGGGGGA TCGCGACCTC ACCGGCGTAC AGCCGTTCAT CATTCCACCG
TTCACCGCAC TCGCCACGGT ACGCGAGATC GCGGTGGACG ATCCCCGCGT CATCCTCGGC
GCCCAGAACG CGCACTGGGA TGACGCGGGG GCCTGGACGG GCGAGATCTC CGTACCCCAA
GCGCTCGACG CCGGCGCACG CATCATCGAG ATCGGCCACT CGGAGCGTCG GCAGCACTTC
GGGGAGACCA TCGAGACGAC GAGGCTGAAA GTCGCAGCCG CGCTCCGGCA CGGGGCACTG
GCTCTCCTCT GCGTCGGGGA ACCCGCCGAG GTCCGGGACG CCGGGCGGAG CACCGCCTAC
ATCCTCGAGC AGGCCGAGGG AGCGCTCGCG GGTTTGTCCG ACGAGCAACT CCGGTCCGTG
CTCATCGCCT ACGAGCCGAT CTGGGCCATC GGTGAGGCCG GGCGCCCCGC GACACCGGAG
GAGCTGCGCG GTCCCTTCGC GGCACTGCGT GAACGATTCG GCGACCGCGT GCGGGGCCTG
TTGTACGGCG GGTCGGTGAA CCAGGACAAC GCCCCGGACC TGCTCCGTAT CGACGGTGTC
GACGGGTTGT TCGTCGGGCG GGCCGCATGG GAGGTCGAGG GCTTCCTGGC GCTGTTGGAC
ATCGCCACGG CCCACAACTC CACCGACTCT TAA
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| Protein sequence | MGTSWKMNKT LAQARDYTVR LVKELGDRDL TGVQPFIIPP FTALATVREI AVDDPRVILG
AQNAHWDDAG AWTGEISVPQ ALDAGARIIE IGHSERRQHF GETIETTRLK VAAALRHGAL
ALLCVGEPAE VRDAGRSTAY ILEQAEGALA GLSDEQLRSV LIAYEPIWAI GEAGRPATPE
ELRGPFAALR ERFGDRVRGL LYGGSVNQDN APDLLRIDGV DGLFVGRAAW EVEGFLALLD
IATAHNSTDS
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