| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28600 |
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| Symbol | |
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| ID | 8388184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3104809 |
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| End bp | 3106521 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976891 |
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| Product | DNA/RNA helicase, superfamily II |
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| Protein accession | YP_003134668 |
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| Protein GI | 257056836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.219312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCCA TCACGGCGGA ACCTCAACAC CTCATCGACA CTCCCACCGG TTTCAGTGAG
CTGGGACTGC GCCCGGAGTT GCTCCAGGCG TTGGCCGAGC TCGGTTACGA GGAACCCACG
CCCATCCAAC GGGCGGCGAT TCCACCGTTG CTCGACGGCT GCGACGTCGT CGGACAAGCC
GCCACCGGCA CGGGGAAGAC CGCCGCGTTC GCGCTGCCCG TGCTGCATCG CATCCGCGAT
GGGGAACGGG GCGAGCGCGG TGCGCGTGCC CAACGCGGGG CAGCCCCGAG CGCCGTGGTG
CTCGTGCCCA CCCGGGAACT CGCCGCGCAG GTGTGCGAGG CGATGCGCCG TTACGGCCGT
CGCCTCGGTG TCCGGGTCCT GCCCGTCTAC GGCGGGCAGT CGATGAGCAG GCAGTTGCGT
GCCCTGGAAG AGGGCGTCGA CGTCGTCGTG GCCACGCCGG GACGGGCGTT GGACCACCTG
TCACGGGGGT CGCTTGACCT CTCGGCGTTG CGGATGGTCG TCCTCGACGA GGCCGACGAG
ATGCTCGACA TGGGCTTCGC CGAGGACATC GACACGATCC TCGAGCGGAC CCCCGACGAC
CGCCAGACCA TGCTGTTCTC CGCCACCATG CCGCCGCGCA TCGCCGGTTT GGTGCGCCGC
TACCTTCGCG ACCCCCGCCG GATCGAACTG AGCAGGGCCG AATCGCTCGA CGGCGACGCC
GCATCGATCA CCCAGACCGC CTATGTCGTG CCCCGGGGCC ACAAACCCGC GGCGCTCGGC
CGCGTGCTCG ACATCGAGAC GCCGGAGGCG ACGGTCGTCT TCTGCCGTAC CAGGGAGGAG
GTCGACCGCC TCACCGAGAC CATGAACGGA CGCGGCTACC GTGCCGAAGC GCTGCACGGT
GGAATGGATC AGCACCAACG CAACCGGGTC GTCGGACGCC TACGGACCGG GACCGCCGAC
CTCGTGGTGG CGACCGACGT AGCGGCCCGC GGGCTGGACA TCGATCAGCT CACCCACGTG
GTCAACTACG ATGTCCCGAG CGCACCCGAG GTGTACGTGC ACCGCATCGG GCGGGTCGGC
AGGGCCGGAC GTCAGGGCAG CGCCATCACC CTCGCCGAGC CCGGGGAGCA CCGCATGATC
AAGGCGATCG AGCGGGTGAC CGGGCAGCCG GTCCCGATAC GCAAACTGCC GACCGTGGCC
GACCTGCGGG CACGGCGGCT GGAACTGACC CGCGCCGCTC TGCGTGAGGT GCTGGCCGGT
GACGAGGACC TCGACCGATA CCGCGCCGTG GTGGAACCTC TGACGGAGGA GTTCGACGTC
ACCGAGATCG CGCTCGCCGC GGTGAAGCTC GCACACGACG CCGAACACGC CACCGACGAG
GAGGAGATCC CGGACGTCGA ATTACGGCCC GAAGTCCGGA CTCGTCGGCT CCCGAAGAAC
GGTCGTAAGG GGAGGCGCAC GAGCGGAGGC ATGACGCGGC TGTTCGTCAG CCTCGGTCGT
CAGGCCGGGG TGCGTCCGCA GGACCTGGTG GGCGCCATCG CCGGCGAATC GTGCCTGCGG
GGTAAGGACG TCGGTGCCAT CGAAATCGCC GACCGCTTCT CCTTGGTGGA CGTTCCGGAC
GCCGCTGCCG ACGAGGTGAT CACGGCGCTG CGGGACAGCA GCATCAAGGG CCGGAAAGTG
ATCGTTCGCC GCGAGCGTCG GACGGCCCGG TGA
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| Protein sequence | MVAITAEPQH LIDTPTGFSE LGLRPELLQA LAELGYEEPT PIQRAAIPPL LDGCDVVGQA
ATGTGKTAAF ALPVLHRIRD GERGERGARA QRGAAPSAVV LVPTRELAAQ VCEAMRRYGR
RLGVRVLPVY GGQSMSRQLR ALEEGVDVVV ATPGRALDHL SRGSLDLSAL RMVVLDEADE
MLDMGFAEDI DTILERTPDD RQTMLFSATM PPRIAGLVRR YLRDPRRIEL SRAESLDGDA
ASITQTAYVV PRGHKPAALG RVLDIETPEA TVVFCRTREE VDRLTETMNG RGYRAEALHG
GMDQHQRNRV VGRLRTGTAD LVVATDVAAR GLDIDQLTHV VNYDVPSAPE VYVHRIGRVG
RAGRQGSAIT LAEPGEHRMI KAIERVTGQP VPIRKLPTVA DLRARRLELT RAALREVLAG
DEDLDRYRAV VEPLTEEFDV TEIALAAVKL AHDAEHATDE EEIPDVELRP EVRTRRLPKN
GRKGRRTSGG MTRLFVSLGR QAGVRPQDLV GAIAGESCLR GKDVGAIEIA DRFSLVDVPD
AAADEVITAL RDSSIKGRKV IVRRERRTAR
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