Gene Svir_28590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28590 
Symbol 
ID8388183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3103818 
End bp3104858 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content69% 
IMG OID644976890 
Productfamily 3 adenylate cyclase 
Protein accessionYP_003134667 
Protein GI257056835 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.19264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATGT CCGACGAGCT CCAACGCAAA CTCGAACACG CCCTCCTCGG CGGCCCACGT 
CGGTATACCC GGCTGGAAGT GGCCGCGAAG TCGGGTGTCT CCCCGGAGCG GGCTCGCCAG
TTGTGGCGGG CCCTCGGGTT CGCCTCGGTC GGCGACGACG AGGTCGTCTT CACCGACGCG
GACGTCGAGG CGGTCCGCAT CGCCGACCGG CTTGTGGGCG AAGGCCTGCT CGATCGGGAC
CTGGAGACGT CGGTGGCCAG GGCCGTGGGG CTGCACATGT CCCGCTTGGC CGAATGGCAG
TCGCAACTGT TGCGCTCGCT GATCGCCGAC AACCCGCATC TGGCCGAGCG GCCCGAACAG
TTGGCCGAAC TCGTCGAACG GTTACTGCCC CAGCTCGGCC GCCTCCACGA CTTCGCCTGG
CGACGGCATC TGGTGGCGTA CTCCGGACGG GCCCTGGCCG CCTCGCACGA ACAGCTGGAG
TCCCGTCACC AGGTCGTCGG TTTCGTCGAC ATGGTGGGCT ACACGCGCAT GGTGCGCCGA
TTCGACGAGG CCGAACTGAG CGCCGTGCTG GAGCGGTTCG AGTCCCTGGC CACGGAAGTG
GTCGTCGAAC ACCACGGCCG TGTCGTCAAG CTCATCGGTG ACGAGGTGTT GTTCGTCTGC
TCGCAACCCG TGGAGGCCGC CGAGATCGCC TTGACGCTCA CCGAACAGGC CGGTGCGGAC
GAGAGGTTGC CCGAGGTTCG TGCCGGGCTG GCCTCGGGCA GGGTGTTGAG CCGGTTCGGG
GACGTCTACG GCTCGGTGGT CAACCTCGCC AGCCGACTCA CCGAGCTCGC CCGGCCAGGC
ACGGTCCTGG TGAACGCCAC GCTGGCCGAC GCGCTCGCCG AGGAGCCCGG CTATTGGGTA
CGCCAGCTGC GGACGATGCA GGTGTCCGGT TTCCGGCGGG TGCGTCCCGC TGTCCTTCGT
CGGGCTCGGC GGAGACCGAA CTCCGAGTCG ATCACCGGGC CGTCCGACGC TCGCGGCGAA
CGATCACTTT CCGGCCCTTG A
 
Protein sequence
MRMSDELQRK LEHALLGGPR RYTRLEVAAK SGVSPERARQ LWRALGFASV GDDEVVFTDA 
DVEAVRIADR LVGEGLLDRD LETSVARAVG LHMSRLAEWQ SQLLRSLIAD NPHLAERPEQ
LAELVERLLP QLGRLHDFAW RRHLVAYSGR ALAASHEQLE SRHQVVGFVD MVGYTRMVRR
FDEAELSAVL ERFESLATEV VVEHHGRVVK LIGDEVLFVC SQPVEAAEIA LTLTEQAGAD
ERLPEVRAGL ASGRVLSRFG DVYGSVVNLA SRLTELARPG TVLVNATLAD ALAEEPGYWV
RQLRTMQVSG FRRVRPAVLR RARRRPNSES ITGPSDARGE RSLSGP