| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28560 |
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| Symbol | |
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| ID | 8388180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3101531 |
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| End bp | 3101992 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976887 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_003134664 |
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| Protein GI | 257056832 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.215327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTATCC TCCTGCTCAT GCAGCAGGCA TTGCAGCCTT TCGTCACCGC CGTCGATCAC
GTCGGCGTCG CGGTTGCCGA CCTGGACGCC GCCATCGCCT TCCACACCGA GCATTTCGGC
CTGGAGGTCA CCCACGTCGA AGTGAACGAG GAGCAGGGCG TGCGGGAGGC CATGCTGCGC
GCACCGGGGG ACGCGGACGG CACCGCCATC CAGCTGCTCG CGCCCTTGAA CGACGAGTCG
ACGATCGCGA AGTTCCTCGA CCGTAACGGA CCCGGCCTGC AACAACTCGC CTATCGGGTG
ACCGACGTCG AGGCCGCCGC GGAGGCGTTG CGGAACAAGG GCTTGCGGGT GCTGTATCCA
CAGGCCCGTC GAGGCACGGC AGGCAGCAAG GTCAACTTCG TGCATCCCAA GGACGCCGGC
GGTGTCCTCG TGGAACTGGT CCAGCCCGGA GACGAGCACT AA
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| Protein sequence | MPILLLMQQA LQPFVTAVDH VGVAVADLDA AIAFHTEHFG LEVTHVEVNE EQGVREAMLR
APGDADGTAI QLLAPLNDES TIAKFLDRNG PGLQQLAYRV TDVEAAAEAL RNKGLRVLYP
QARRGTAGSK VNFVHPKDAG GVLVELVQPG DEH
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