Gene Svir_28520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28520 
Symbol 
ID8388176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3097677 
End bp3098177 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content65% 
IMG OID644976883 
Producttranscriptional regulator 
Protein accessionYP_003134660 
Protein GI257056828 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.11244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTC CGTTGCCGTT CGACCCGATC GCGCGCGCGG CGCAACTGTG GGAGGACCGC 
ATCGGGCCTT CCACCACGAT GGCCGCCGTC ACCGGGTTGA TGCGCGTCCA GCAGATCATC
CAGTCTGCCG TCGACACGGC GCTCAAACCC CACGGCCTGA CGTTCGCGCG GTTCGAGGCG
CTGACACTGT TGACCTTCGC GCGGCAGTCA CGGTTGCCGA TGCGGGTCAT GGGCGAACGT
CTTCAGCTCC ACCCGACGAG CGTGACCAAC ATCGTGGACC GGCTTGAGAA GGACGGTCTC
GTCGAACGGC TTCCTCATCC CACCGACCGG CGGACGACGC TGGTCGAGAT CACCGAGGAA
GGCATGCGGC GACGGGAGGA GGCCACCAAG GCCATCACCG ACATCAACTT CGGCCTCGTC
GGACTCACCC AACGGCAGAC GGAACAGCTC ACCGAGCTGC TGACGAAGGT GCGTAAGGCC
GCGGGCGACT TCATCGACTG A
 
Protein sequence
MKGPLPFDPI ARAAQLWEDR IGPSTTMAAV TGLMRVQQII QSAVDTALKP HGLTFARFEA 
LTLLTFARQS RLPMRVMGER LQLHPTSVTN IVDRLEKDGL VERLPHPTDR RTTLVEITEE
GMRRREEATK AITDINFGLV GLTQRQTEQL TELLTKVRKA AGDFID