| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28480 |
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| Symbol | |
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| ID | 8388172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3092022 |
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| End bp | 3094577 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976879 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_003134656 |
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| Protein GI | 257056824 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.347339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.510878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTG TCCGCCGGTT CACCGTGCAC GCGCGTGTGC CCGACGAGTT GTCGGGTCTG
GCCGAATTGG CCACCAATCT TCGGTGGACC TGGCATCCGC CGACGCGCGA CCTGTTCGCG
TCGATGGATG ACGCCCTGTT CCGGCGGATC CGGGATCCGC TGCGCATGCT CGCCGAAGTG
CCCGCTTCCC GGTTGGACGA ACTGGCACGC GATCCGGAGT TTCTGGACCG CACCCGCAAA
GCGAGTGAGG ACCTGCAGCG GTATCTCACC GAGCCGCGGT GGTACCAGCG CCGAATGGAG
CAGGCCGAGG ACGGCGAACG TTTCCCGCGG GCCATCGCGT ACTTCTCCAT GGAGTTCGGG
GTCCACGAGG CGTTGCCGAA CTACTCCGGC GGACTCGGCG TGCTGGCGGG AGACCACCTC
AAGGCCGCTT CCGACCTCGG CGTGCCCGTG ATCGGTGTCG GACCGCTGTA CCGGGCGGGG
TATTTCCGGC AGTCGTTGTC CTTGGACGGC TGGCAGGTGG AGCACTACCC GGTGATCGAT
CCCAGTGGGC TGCCGCTGGA GTTGCTCACC GAGCCGTCGG GGGAGCCGGT GTACGTGCAC
GTGGCCATGC CCGGGGGGCG GGACCTGCTG GCGCAGATCT GGCTGGCGCG GGTGGGTCGG
GTGCCGTTGT TGTTGCTCGA CACCGACGTG GAGGGCAACG ACGAGGATCT GCGTGGTGTC
ACCGACCGGC TGTACGGCGG CGACGACGAC CACCGCATCC GGCAGGAGAT CCTCGCGGGG
ATCGGCGGGA TGCGCGCGGT ACGGCGCTAC TGCGAGCTGA CGGGACATCC GCAGCCCGAG
GTGTTCCACA CCAACGAGGG CCACGCCGGG TTTCTCGGGC TGGAACGGGT CCGGGAGGTG
CTGGCCGAGG GGGAGCTGAC GTTCGAGGAG GCGTTGTCGG CCGTGCGGGC GGGCACGGTC
TTCACCACGC ACACACCGGT GCCGGCCGGC ATCGACCGGT TCGGGGTGGA CCTGGTCAGG
CACTACTTCG GTGACGGGCG GCTGCTTCCG GGGGTGGACG TCGAGCGGGT GCTCGCGCTC
GGCAGCGAGG ACAACCCCGA GCGGTTCAAC ATGGCGCACA TGGGGTTGCG GTTGGCGCAG
CGCGCCAACG GCGTGTCGGC CCTGCACGGG AAGGTGTCGC GGCGGATGTT CAGCCGGCTG
TGGCCCGGCT TCGACATCGA GGAGGTGCCG ATCTCCTCGG TGACCAACGG TGTGCACGGC
CCGACCTGGG TGGCCCGGGA GATGAGCGCC CTGCTGGGCG GCAGCGACGA GGAATGGGGC
CATGACGGCA ACGGTTCGGG GATCGACCCG AACGTCACCG ACGAACAGCT GTGGGCGTTG
CGCCGGGAGT TGCGCGGCAA TCTGGTGGCC GAGGTGCGGC GTCGGGCGCG GGAGGCGTGG
TTGCAGCGCG GCGCCTCGGC GTTGGAACTC GGCTGGACCG AGCGCATCTT CGACCCCGAC
GTGCTCACCG TCGGTTTCGC CCGACGTGTC CCCACCTACA AGCGGCTCAC CCTGATGCTG
CGGGACCCCG AACGGTTGCG TGCGTTGCTG TTGGACGACG AAAGGCCCAT CCAGATCGTG
GTCGCGGGTA AGTCCCATCC GGCCGACGAG GGTGGCAAGG CGCTCATCCA GCAGATCGTG
CGGTTCGTCG ACGACCCGGC CGTGCGGGAG CACATCGTCT TCCTGCCCGA TTACGACATG
TCGATGGCCC GGTACCTGTA CCGCGGCTGC GACGTGTGGT TGAACAACCC GACCCGGCCG
TTGGAGGCGT GCGGTACCTC GGGCATGAAG GCCGCGTTGA ACGGGTGTCT GAACCTGTCG
ATCCGTGACG GGTGGTGGGA CGAGTACTAC GACGGCAGCA ACGGGTGGGC CATCCCCACC
GCCGACGGCG TCACCGATCC GCTGCTGCGG GACGATCTCG AGGCCGCCGC GTTGTACGAC
CTGTTGGGCC AACAGGTCGC GCCGCTGTTC TACGACCGGG ACGAGAACGG GGTGCCGCGG
GGTTGGTTGT CGATGATCTG GCACACCCTG CGCACACTCG GACCGCGCGT CCAGGCGTCG
CGCATGGTGC GTGAGTACGT GGAGTCCTTC TACCGTCCCG CGGCGACCAC CGTGGCGGCC
GCGGTGGCCG ACGACTACGC GGGGGCGCGT TCGCTGGCCG CCTACCGGGC CCGGGTGGAC
GCGTGCTGGC CGTTGTTGCG TGTGGTGTCC ACGGAGTTGT CGGTGGAGGA CAGTGACGTG
CCCGTCGTGG GCGCCCGCGC CCGGATCACC GCCCGCGTCG AGCTCGCGGA ATTGGATGAG
GACGATGTGG AGGTCCAGGC CGTCGTGGGC AGGGTCGGGG ACACCGACGA CCTCAGCGAC
GTCGTGACCG CCACCATGGC GCCGTGCGGA CGCGGCGAGT TCGTGACTTC CCTGCGACTG
CCGTTCGCCG GGTCCCTCGG TTACACCGTG CGTGTGCTGC CCAAGCATCC GCTGTTGGCG
ACCCCGGCCG AACTGGGCAG GGTCGTGTTG GCCTGA
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| Protein sequence | MKAVRRFTVH ARVPDELSGL AELATNLRWT WHPPTRDLFA SMDDALFRRI RDPLRMLAEV
PASRLDELAR DPEFLDRTRK ASEDLQRYLT EPRWYQRRME QAEDGERFPR AIAYFSMEFG
VHEALPNYSG GLGVLAGDHL KAASDLGVPV IGVGPLYRAG YFRQSLSLDG WQVEHYPVID
PSGLPLELLT EPSGEPVYVH VAMPGGRDLL AQIWLARVGR VPLLLLDTDV EGNDEDLRGV
TDRLYGGDDD HRIRQEILAG IGGMRAVRRY CELTGHPQPE VFHTNEGHAG FLGLERVREV
LAEGELTFEE ALSAVRAGTV FTTHTPVPAG IDRFGVDLVR HYFGDGRLLP GVDVERVLAL
GSEDNPERFN MAHMGLRLAQ RANGVSALHG KVSRRMFSRL WPGFDIEEVP ISSVTNGVHG
PTWVAREMSA LLGGSDEEWG HDGNGSGIDP NVTDEQLWAL RRELRGNLVA EVRRRAREAW
LQRGASALEL GWTERIFDPD VLTVGFARRV PTYKRLTLML RDPERLRALL LDDERPIQIV
VAGKSHPADE GGKALIQQIV RFVDDPAVRE HIVFLPDYDM SMARYLYRGC DVWLNNPTRP
LEACGTSGMK AALNGCLNLS IRDGWWDEYY DGSNGWAIPT ADGVTDPLLR DDLEAAALYD
LLGQQVAPLF YDRDENGVPR GWLSMIWHTL RTLGPRVQAS RMVREYVESF YRPAATTVAA
AVADDYAGAR SLAAYRARVD ACWPLLRVVS TELSVEDSDV PVVGARARIT ARVELAELDE
DDVEVQAVVG RVGDTDDLSD VVTATMAPCG RGEFVTSLRL PFAGSLGYTV RVLPKHPLLA
TPAELGRVVL A
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