Gene Svir_28460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28460 
Symbol 
ID8388170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3090276 
End bp3091055 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID644976877 
Productshort chain enoyl-CoA hydratase 
Protein accessionYP_003134654 
Protein GI257056822 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.528871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.841191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGAGT TCGTGCGTCT CGAGGTCGAC GCGGGTGTCG GCACCATCCG GCTGGACCGG 
CCGCCGGTGA ACGCCCTGAA CAACCAGGTG CAGGCGGAAC TGGCCGAGGC CGCGAAGGAA
GCGGCGGAGC GCGACGACGT GCGGGCCGTC ATCCTCTACG GCGGGGAGAA GACCTTCGCG
GGCGGCGCCG ACATCAAGGA GATGGCCGCG AAGTCCTATG TCGAGATGCA GCGGTTCGGC
ACGGCGCTGT CGGAGTCGTT GACCCTGATC GCGGAGCTGC CGAAGCCCAC GGTCGCCGCG
ATCACCGGTT ACGCGCTGGG TGGTGGGCTC GAGCTGGCGT TGACCGCCGA CCGCAGGGTG
GCGGGCGACA ACGTCAAGGT GGGACAGCCG GAGATCCAGC TCGGCATCAT CCCCGGAGCG
GGCGGTACCC AACGACTCGC CAGGTTGGTG GGACCGAGCC GGGCCAAGGA CATCGTGTTC
ACCGGCCGGT TCGTCAAGGC CGAGGAGGCG CTGGCCATCG GTCTGGTCGA CGAGGTCGTG
GCGCCCGACG AGGTGTACGC CGCCGCGCAT CGGTGGGCCT CGCAGTTCGT GAACGGCCCG
GCCGTGGCGC TGCGGGCGGC GAAGATCGCC ATCGACGCCG GTCTCGACAT GGACCTGCGC
AACGGGTTGA AGCTGGAGAC CCAGCTGTTC ACCGGCCTGT GGGCGACCGA GGACCAGAAG
CGCGGTATGC AGTCGTTCAT CGAGAACGGG CCGGGCAAGG CCACCTTCGA GGGGAAGTGA
 
Protein sequence
MGEFVRLEVD AGVGTIRLDR PPVNALNNQV QAELAEAAKE AAERDDVRAV ILYGGEKTFA 
GGADIKEMAA KSYVEMQRFG TALSESLTLI AELPKPTVAA ITGYALGGGL ELALTADRRV
AGDNVKVGQP EIQLGIIPGA GGTQRLARLV GPSRAKDIVF TGRFVKAEEA LAIGLVDEVV
APDEVYAAAH RWASQFVNGP AVALRAAKIA IDAGLDMDLR NGLKLETQLF TGLWATEDQK
RGMQSFIENG PGKATFEGK