Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_28460 |
Symbol | |
ID | 8388170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3090276 |
End bp | 3091055 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976877 |
Product | short chain enoyl-CoA hydratase |
Protein accession | YP_003134654 |
Protein GI | 257056822 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.528871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.841191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGAGT TCGTGCGTCT CGAGGTCGAC GCGGGTGTCG GCACCATCCG GCTGGACCGG CCGCCGGTGA ACGCCCTGAA CAACCAGGTG CAGGCGGAAC TGGCCGAGGC CGCGAAGGAA GCGGCGGAGC GCGACGACGT GCGGGCCGTC ATCCTCTACG GCGGGGAGAA GACCTTCGCG GGCGGCGCCG ACATCAAGGA GATGGCCGCG AAGTCCTATG TCGAGATGCA GCGGTTCGGC ACGGCGCTGT CGGAGTCGTT GACCCTGATC GCGGAGCTGC CGAAGCCCAC GGTCGCCGCG ATCACCGGTT ACGCGCTGGG TGGTGGGCTC GAGCTGGCGT TGACCGCCGA CCGCAGGGTG GCGGGCGACA ACGTCAAGGT GGGACAGCCG GAGATCCAGC TCGGCATCAT CCCCGGAGCG GGCGGTACCC AACGACTCGC CAGGTTGGTG GGACCGAGCC GGGCCAAGGA CATCGTGTTC ACCGGCCGGT TCGTCAAGGC CGAGGAGGCG CTGGCCATCG GTCTGGTCGA CGAGGTCGTG GCGCCCGACG AGGTGTACGC CGCCGCGCAT CGGTGGGCCT CGCAGTTCGT GAACGGCCCG GCCGTGGCGC TGCGGGCGGC GAAGATCGCC ATCGACGCCG GTCTCGACAT GGACCTGCGC AACGGGTTGA AGCTGGAGAC CCAGCTGTTC ACCGGCCTGT GGGCGACCGA GGACCAGAAG CGCGGTATGC AGTCGTTCAT CGAGAACGGG CCGGGCAAGG CCACCTTCGA GGGGAAGTGA
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Protein sequence | MGEFVRLEVD AGVGTIRLDR PPVNALNNQV QAELAEAAKE AAERDDVRAV ILYGGEKTFA GGADIKEMAA KSYVEMQRFG TALSESLTLI AELPKPTVAA ITGYALGGGL ELALTADRRV AGDNVKVGQP EIQLGIIPGA GGTQRLARLV GPSRAKDIVF TGRFVKAEEA LAIGLVDEVV APDEVYAAAH RWASQFVNGP AVALRAAKIA IDAGLDMDLR NGLKLETQLF TGLWATEDQK RGMQSFIENG PGKATFEGK
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