Gene Svir_28380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28380 
Symbol 
ID8388162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3080551 
End bp3081828 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content66% 
IMG OID644976869 
ProductZinc carboxypeptidase 
Protein accessionYP_003134646 
Protein GI257056814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCGT TGCTCGCGAC CGCTTCCCCG GCCATCGCGG AGTCGACCGA CCTCTCCGAG 
GTACCCGCCT ACTCGACCCA GCTCGATCGT CCTCGGGCAA CGGACGAGGC GTTCGTCTCC
GCGGCTCAGG AGTGCAGCGA CGAGCCGCGT GACCTGCCGA TCAACGAGTT CACCGACCAT
CGCGAACTCG GCATCGAGCT GGACCGCATC GAGCGGATCA GCGACGGCAA GGTGGACGTC
CAGCAGATCG GCATGAGCAA CCGCGGGCGC GAGATCTGGA GCGCGAGGGC GGGGACGGGC
CCCAAGGCGG TACTGATCAC CAGCGAGATC CACGGCAACG AGAAGACCGG TACCGACGCC
ATACTCGACC TGTTGGACTG GCTGGCCACC AGTGACTCGG CGAAGGCACG GCGGTGGCTT
GACGAACTGA CCATCGTCGC GATCCCGAAG ATCAACCCCG ACGGTGCCGA ACTGGACCGG
CGCGGCAATG ACATGACGTG GGAGGAGGTG ACGGCTCGGT TCCCGCAGCT GCGGGGGAGC
GAGCCCGCCT GGAACTACTA CACCGGCACG CTCCAGGGGG ACGACTATTC GGAGCGGCCC
GGGTTCGACG TCAACCGTGA CTATCACCCG GATCTGAACT ACGTGCCGCG TGCCGAGGAC
TTCCCCGGTA GTTCCGAGTC CCCCGGGTGG TACATCACAC CGGAGAGTAG GACGGTGCGA
GACGTCTACC GTGGGTTGCA GGCCGAATTC GGCAAGGTGG ACGTCTACGT CGACCTGCAC
CACCAGGGCG CGTGCTACGT GATGCCGGAC GACCCGGACG AATTCGTCAC CCTGTCGATC
TCCGGCAAGT TCGTCGACGA TCCGGCCACC ACGCCGGGAT ACGAGCAGTA CGCCGCGGAC
TACGACCTGG ACTACTCCAA ACGGCTCAAC GTCGCGGTCT ACAACGCGCT GCAGGGGGCG
GCGAACAACC GACCGTTGTT CGGCAACGTC ACGCTCTACC CTCAGGATCT CCACCTGCCG
GGGACCGGGC TCGGGAGTTT CGCGCTCAAC GGAAGCGGCA CGGTGTTGTT CGAGGTGCGC
GGACAGACCC AGACGCTCGG CCAGCAGTAT CGCGCGGCGT TGACCAGGGC TGTCTACATC
GGACTCGACG GGATGCTCTC CGCGGTGGCC AGCGGCCGGG TGAACCAGCT CGACCCGGCC
GACTACGACG CGATCCCGCC GCGTGGTCCG AGTATCGGTA GCGTCATCGA CGACACACGG
ACGGTGGCCT CGCACTGA
 
Protein sequence
MFALLATASP AIAESTDLSE VPAYSTQLDR PRATDEAFVS AAQECSDEPR DLPINEFTDH 
RELGIELDRI ERISDGKVDV QQIGMSNRGR EIWSARAGTG PKAVLITSEI HGNEKTGTDA
ILDLLDWLAT SDSAKARRWL DELTIVAIPK INPDGAELDR RGNDMTWEEV TARFPQLRGS
EPAWNYYTGT LQGDDYSERP GFDVNRDYHP DLNYVPRAED FPGSSESPGW YITPESRTVR
DVYRGLQAEF GKVDVYVDLH HQGACYVMPD DPDEFVTLSI SGKFVDDPAT TPGYEQYAAD
YDLDYSKRLN VAVYNALQGA ANNRPLFGNV TLYPQDLHLP GTGLGSFALN GSGTVLFEVR
GQTQTLGQQY RAALTRAVYI GLDGMLSAVA SGRVNQLDPA DYDAIPPRGP SIGSVIDDTR
TVASH