Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_28370 |
Symbol | |
ID | 8388161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3079040 |
End bp | 3080467 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644976868 |
Product | predicted transcriptional regulator |
Protein accession | YP_003134645 |
Protein GI | 257056813 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAGA CTTTCGCCGG AGCGCGACTG CGTCATCTGC GAGAAAGCCG GTCGATGAGC CAAGCCGAGC TGGCTCGACT GCTCGAAATC TCACCGAGTT ACCTCAACCA GATCGAGCAC AACACCCGTC CGCTGACCGT TCCGGTACTG CTTCGCATCA CCGAAGCGTT CGGTGTGGAC GCCGAGTTCT TCGCCAACAA CGACACCTCC CGACTTGTCG CCGACGTCCG AGAGGCACTG TTGGACGAGT CGGTCAACGC CGACGTCTCC CCCGGGGAGA TCAACGACTT GGCGAAGAAC CTGCCCTCGG TGGCGCAGGC ACTGGTCAAG TTGCACCGCA ACTACCGCAA CGCCATCGAG GCCACCGCGG CGCTCGTCAC CGAGGACGGG CGCGGCACCC ACGGCAGCCC CGCGGCACCC CTCCCCCACG AGGAGGTGCG GGACTTCTTC TACGAGCGCG AGAACTACGT CGCCGAACTC GACGAACGCG CCGAGAAGAT GTACGAGGAA CTGGGCCTGC GTCGAGACGA GATCCGAAAC GGACTGCGCG ATCGCCTGGC CGAACACTAC GGCGTCACCG TGACCACCGA GGGACTCAAC CTCGCCGCGG GCGAACAACA CCGTTACGAA CCCGACGCGA AGGTGCTGCG ACTGGCGCCG ACACTGCGCA TCGGACAGCA GGCGTTCCGC ATGGCCTCGC AGATCGCGCT GCTGGAGTAC GACGACCTGA TCACCGAACT GGCCGATTCG TGGGCGTTCT CGGGCCCACC GGCACGCTCG TTGGCGCGGG TGGGCCTGGC GAACTACTTC GCGGGCGCGC TGATCCTGCC CTACAAGGCG TTCCTCAGCG CGGCCGAACG GTTCCGCTAC GACATCGAGT TGCTGTGCGA GCACTTCGGT GTCGGATTCG AGACGGTGTG CCACCGCCTG TCCACGTTGC AACGGCCCAA GATGCGCGGT ATTCCGTTCT CGTTCGTCCG GGTCGACCGC GCGGGCAACA TGTCGAAGCG CCAATCGGCC GCCGGGTTCC ACTTCTCCCG CGTGGGCGGT GCTTGTCCGT TGTGGGTCAT CTACGAGGCG TTCACCCGCC CCGGCAAGAT CCTCCCCCAG GTCGTGACGC TGCCGGACGG CAAAAGCTAC TTCTGGATCG CGCGCACCGT CTCCCGCAAC ATCGGCGGGT ACGGCAGTCC GGGGAAGATG TTCTCGGTGG GACTCGGCTG CGAACTACGC CACGCCCACC GACTGGTCTA CTCCGCGGGG TTGAACCTCG ACGACAAGTC CGCAGCCACC CCCATCGGCA TGGGCTGCAA GGTGTGTGAA CGTCCCGCCT GCCCCCAACG GGCGTTCCCG ACGATCGGCA AGGAACTGAC AGTGGACGAG AACACCAGCA CGTTCGTCCC GTATCCCGCG GTACCGAAGA CGGACTGA
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Protein sequence | MSKTFAGARL RHLRESRSMS QAELARLLEI SPSYLNQIEH NTRPLTVPVL LRITEAFGVD AEFFANNDTS RLVADVREAL LDESVNADVS PGEINDLAKN LPSVAQALVK LHRNYRNAIE ATAALVTEDG RGTHGSPAAP LPHEEVRDFF YERENYVAEL DERAEKMYEE LGLRRDEIRN GLRDRLAEHY GVTVTTEGLN LAAGEQHRYE PDAKVLRLAP TLRIGQQAFR MASQIALLEY DDLITELADS WAFSGPPARS LARVGLANYF AGALILPYKA FLSAAERFRY DIELLCEHFG VGFETVCHRL STLQRPKMRG IPFSFVRVDR AGNMSKRQSA AGFHFSRVGG ACPLWVIYEA FTRPGKILPQ VVTLPDGKSY FWIARTVSRN IGGYGSPGKM FSVGLGCELR HAHRLVYSAG LNLDDKSAAT PIGMGCKVCE RPACPQRAFP TIGKELTVDE NTSTFVPYPA VPKTD
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