Gene Svir_28250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28250 
Symbol 
ID8388149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3065137 
End bp3066096 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content69% 
IMG OID644976856 
Productelectron transfer flavoprotein, alpha subunit 
Protein accessionYP_003134633 
Protein GI257056801 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG TACTCGTCCT CGTCGACCAC GTCGACGGTG AGGTCAAGAA GGTCACGTAC 
GAACTGCTGA CCGCCGCCCG TGCGCTCGGC GAACCGTCGG CCGTCGTGGT CGGCGCGCCC
GGTACGGCGG CGAAGGCCAA GGAGTCGCTG GCGTCCTACG GCGCCGCGAA GGTGTACGTG
GCCGAGTCCG ACGACGCCGC GACCTACTTC GTCACGCCGA AGGTCGATGC CCTGGCGGCC
GTCGTGGAGC AGGCCTCACC CGCTGCGGTG CTCGTCGCCG CGACCGCCGA GGGCAAGGAA
GTGTCCGGAC GGCTGGCCGC GCGTATCGGC TCCGGCTGGA TCGGCGACGC CGTGGGTGTG
AACGCCGACG GCAGCGTCGA ACAGTCGATC TTCGGTGGCG CGTTCTCCGT GAAGTCGAAG
ACCACTCGGG GCGTGCCGGT GGTCTCCGTG CGGCCCGGCT CCGTCGAGGC GGAGCAGGCC
GAGGGTGCGG CGGTCGAGGA GACCGTCTCG TTGCCCGCTG TGGACCCGGC CAAGTCCGCC
AAGATCACCG GTGTCGAGCC GGTCGTCGCC GGTGACCGCC CCGAGTTGAC CGAGGCCTCG
GTCGTGGTCT CGGGTGGCCG TGGTGTCGGT TCCGCGGAGA AGTTCGAGGT CGTGGAGAAG
CTGGCCGACT CGCTCGGTGC GGCCGTCGGT GCCTCCCGTG CGGCGGTGGA CTCCGGGTAC
TACCCGGCCC AGTTCCAGGT CGGACAGACC GGTAAGACCG TGTCGCCGCA GCTCTACATC
GCGCTCGGCA TCTCCGGCGC GATTCAGCAC CGTGCGGGTA TGCAGACCTC GAAGACGATC
GTCGCGGTGA ACAAGGACCC CGAGGCGCCG ATCTTCGAGA TCGCCGACTT CGGTGTGGTG
GGTGACCTGT TCGACGTCGC CCCGCAGCTG ACCGAGGAGA TCAACAAGCG CAAGGGCTGA
 
Protein sequence
MSEVLVLVDH VDGEVKKVTY ELLTAARALG EPSAVVVGAP GTAAKAKESL ASYGAAKVYV 
AESDDAATYF VTPKVDALAA VVEQASPAAV LVAATAEGKE VSGRLAARIG SGWIGDAVGV
NADGSVEQSI FGGAFSVKSK TTRGVPVVSV RPGSVEAEQA EGAAVEETVS LPAVDPAKSA
KITGVEPVVA GDRPELTEAS VVVSGGRGVG SAEKFEVVEK LADSLGAAVG ASRAAVDSGY
YPAQFQVGQT GKTVSPQLYI ALGISGAIQH RAGMQTSKTI VAVNKDPEAP IFEIADFGVV
GDLFDVAPQL TEEINKRKG