| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28230 |
|---|
| Symbol | |
|---|
| ID | 8388147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3063017 |
|---|
| End bp | 3064084 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976854 |
|---|
| Product | valine dehydrogenase (NAD) |
|---|
| Protein accession | YP_003134631 |
|---|
| Protein GI | 257056799 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGG GTGTATTCGG CCGCGACGGC GGCCATGAAC AGGTGGTCTA CTGCCAGGAC
CCGCAAACCG GGCTCAAGGC GATCATCGCA GTGCACTCCA CCGCGTTGGG ACCCGCACTC
GGCGGGGTTC GCTTCTATCC GTACGAATCG GAGCGGGACG CGCTGGACGA CGTGCTGGCC
CTGTCGATGG GCATGTCGTA CAAGAGCGCA CTCGCCGGCC TCGACCTCGG TGGGGGTAAG
GCCGTCATCA TCGGCGATCC CGACACGCTG AAGTCGGAGC CGTTGCTGAG GGCGTACGGC
CGATTCGTCG ACTCGCTCGG CGGACGCTAC ATCACCGCGT GCGACGTGGG CACGTACGTG
GCGGACATGG ACATGATCGC CAGGGAGACG ACCTTCGTCA CCGGCCGGTC CAGCGACGAC
GGCGGATCCG GGGACCCCTC GGGGATGACC GCTTACGGCG TCTTCCAAGG CATGCGTGCG
GCGGCCGAAC ACCGGTGGGG CAGCCCGGAC CTGCGCGGCA AACGTGTCGG TGTGTCGGGT
GTCGGCAAGG TCGGTCGTCT CCTTGTGGAC CACCTCGTCG AGGCGGGCGC GGAAGTCGTC
GTCACCGACG TCTCCGAAGC CGCGATCGAC CGGGTGCGTG CGGCTCATCC CTCGGTGAGG
GTCGTCGCCG ACACGGCGGA ACTGGTGTCG TGCGACCTCG ACGTCTACGC GCCGTGCGCG
TTGGGCGGTG CACTCGACGA CGCCACAGTG GCCGCATTGC GCGCCGAGAT CGTCTGCGGT
TCGGCGAACA ACCAGCTCGC GCATTCCGGT GTCGAGAAAC TGCTCGACGA ACGCGGCATC
CTCTACGCCC CCGACTATCT GGTCAACTCC GGCGGGCTCA TTCAGGTCAG CGACGAACTG
CACGGGTTCA ACTACGAGCG TGCCCGTCGC AAGGTGAGTG GCCTGTTCGA CATGACGAAG
AAGGTGTTCG CGCTCGCCGA GGAGGAAGGG GTGCCGCCGG CGACCGCGGC CGACCGGCTC
GCGGAACGGC GCATGGCCGA GGTGTCGAGA CTCCGGATGA TCCGCTGA
|
|---|
| Protein sequence | MTEGVFGRDG GHEQVVYCQD PQTGLKAIIA VHSTALGPAL GGVRFYPYES ERDALDDVLA
LSMGMSYKSA LAGLDLGGGK AVIIGDPDTL KSEPLLRAYG RFVDSLGGRY ITACDVGTYV
ADMDMIARET TFVTGRSSDD GGSGDPSGMT AYGVFQGMRA AAEHRWGSPD LRGKRVGVSG
VGKVGRLLVD HLVEAGAEVV VTDVSEAAID RVRAAHPSVR VVADTAELVS CDLDVYAPCA
LGGALDDATV AALRAEIVCG SANNQLAHSG VEKLLDERGI LYAPDYLVNS GGLIQVSDEL
HGFNYERARR KVSGLFDMTK KVFALAEEEG VPPATAADRL AERRMAEVSR LRMIR
|
|---|
| |